Gene Information

Name : CCU_11160 (CCU_11160)
Accession : YP_007796133.1
Strain : Coprococcus sp. ART55/1
Genome accession: NC_021018
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1114021 - 1115331 bp
Length : 1311 bp
Strand : +
Note : -

DNA sequence :
ATGAGAAATTACACAACACAGATGGACGCAGCAAGAAAAGGCATAGTAACTCCTGAGATCGAGAAAGTTGCCGAGAAAGA
GCATATGTCCACTGAGGCGCTGATGAAACTGGTAGGAGAGGGTAAGGTAGCGATACCTGCCAACAAGAAGCACACATGCT
TAAACCCAGAGGGAGTTGGAAGCATGCTGAGGACCAAGATTAATGTCAACCTCGGCGTGTCAAGAGACTGCAAGGATTAT
GGTATCGAGATGCAGAAGGTTATGAGTGCTGTCGAGATGGGAGCAGAGGCGATCATGGATCTGTCAAGCCATGGCAATAC
ACAGCCGTTCAGACAGAAGCTCACTTCAGAGTGTCCGGCTATGATAGGAACTGTGCCGGTATATGACAGCGTTATCCACT
ATCAGAGAGACCTTGCGACACTGACAGCACAGGATTTCATCGATGTGGTACGTCTTCATGCGGAGGATGGAGTTGATTTT
GTGACTCTCCACTGCGGAATAACAAGAAAGACGATCGAACAGATCAAGAAACATAAGAGAAAGATGAACATAGTAAGCCG
TGGCGGCAGTCTTGTATTTGCATGGATGACCATGACAGGCAATGAGAATCCGTTCTACGAGTATTTTGACCAGATCCTTG
ATATATGCGAGGAATACGATGTGACAGTATCACTTGGAGATGCATGTCGTCCGGGATGTCTTGCGGACGCAACGGATGTA
TGTCAGATAGAGGAGCTTGTCAGACTTGGAGAGCTGACAAAGCGCGCGTGGGATCATAACGTACAGGTTATGGTTGAGGG
CCCTGGTCATGTGCCACTCAATCAGATTGCAGCCAACATGGAAGTTCAGAAGACACTCTGTATGGGCGCACCATTCTACG
TACTTGGACCTCTTGTCACAGATATAGCACCGGGATACGATCACATCACAAGTGCCATAGGCGGAGCGGTCGCAGCCATG
AACGGCGCAGCATTCCTCTGTTACGTAACACCAGCAGAGCACCTTGCCCTGCCAAATGTAGACGATGTCAAGCAGGGAAT
CATAGCCTCCAAGATAGCAGCCCATGCGGCAGATATAGCAAAGGGGATACCTGGAGCGAGGGATATAGATGACAAGATGG
CGGATGCGAGACGTGTCCTCGACTGGGATGCACAGTTTGCATGTGCCATAGATCCTGAGACTGCAAAGGAGATCAGGGAC
AGCAGGAAGCCTGATGACGAGTACAGCGACACGTGCAGTATGTGCGGTAAATTCTGTGCTGTCAGATCGATGAACAAGGC
GTTGTCAGGGGAATACATAGATATACTGTAA

Protein sequence :
MRNYTTQMDAARKGIVTPEIEKVAEKEHMSTEALMKLVGEGKVAIPANKKHTCLNPEGVGSMLRTKINVNLGVSRDCKDY
GIEMQKVMSAVEMGAEAIMDLSSHGNTQPFRQKLTSECPAMIGTVPVYDSVIHYQRDLATLTAQDFIDVVRLHAEDGVDF
VTLHCGITRKTIEQIKKHKRKMNIVSRGGSLVFAWMTMTGNENPFYEYFDQILDICEEYDVTVSLGDACRPGCLADATDV
CQIEELVRLGELTKRAWDHNVQVMVEGPGHVPLNQIAANMEVQKTLCMGAPFYVLGPLVTDIAPGYDHITSAIGGAVAAM
NGAAFLCYVTPAEHLALPNVDDVKQGIIASKIAAHAADIAKGIPGARDIDDKMADARRVLDWDAQFACAIDPETAKEIRD
SRKPDDEYSDTCSMCGKFCAVRSMNKALSGEYIDIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-69 45
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-69 45