Gene Information

Name : CCU_24670 (CCU_24670)
Accession : YP_007797154.1
Strain : Coprococcus sp. ART55/1
Genome accession: NC_021018
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2611979 - 2612434 bp
Length : 456 bp
Strand : +
Note : -

DNA sequence :
ATGATATACAGGATTGCCTGCGTCGGCAGGATAAAGGAACAGCATTTTACGCAGATGTTAAATGAATATAAGAAGGAGAT
CGACAAGAGAGGACGTCTGGAGATATGCGAGGTTCCTGACGAGAGGATACCTCAGAAGGCTGGCGACAAGGTAAATGCCA
TGATCATTGAGGCCGAGGCGGACAGGCTGAGACATGTGATCGGGAGAGACGACTATGTTATAGCACTGTGTATAGAAGGA
AAGAAGACGACCACGGAAGGACTTGCCGATCAGGTCCGCAGGGCATCGGAGCGCGGACATGACACGGTTACATTTGTGAT
AGGGGGATCTCTTGGACTTGCTGCAGATATAGTGAGGAGGGCTGATTACAGGATGAGCGTGTCGGATATGACATTTCCGC
ATCAGCTCATAAGGGTGACGCTGGCGGAGCAGCTTGCGATCATAAGCCGGAGCTGA

Protein sequence :
MIYRIACVGRIKEQHFTQMLNEYKKEIDKRGRLEICEVPDERIPQKAGDKVNAMIIEAEADRLRHVIGRDDYVIALCIEG
KKTTTEGLADQVRRASERGHDTVTFVIGGSLGLAADIVRRADYRMSVSDMTFPHQLIRVTLAEQLAIISRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 2e-23 43
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-24 42
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 1e-24 42
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 4e-22 42
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-24 42
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-23 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-23 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-23 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-23 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-23 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-23 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-23 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-23 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-23 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-23 41
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-23 41
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-23 41