Gene Information

Name : BXY_02390 (BXY_02390)
Accession : YP_007791101.1
Strain : Bacteroides xylanisolvens XB1A
Genome accession: NC_021017
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 270149 - 270826 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGATGGCAAAGATATTATTAGTTGAAGATGAAATAAACATCGCCTCTTTCATTGAACGGGGGTTAAAAGAGTTCGGACA
TACAGTAACCGTCTGTCATGACGGAAACGCCGGTTGGAAAATCCTTCAGGACGAACCTTTCGACCTTTTGATACTGGACA
TTATCATGCCGAAAATAAACGGTTTGGAACTTTGCCGGCTTTATCGGCAGACGTTTGGGTACCAGTCTCCTGTGATCATG
CTGACAGCCTTGGGTACAACGGAAGATATCGTCAAAGGACTGGATGCGGGAGCAGATGATTATCTCGTCAAGCCTTTCAG
TTTCCAAGAACTGGAGGCACGCATCAAGGCCTTGTTAAGACGCAATAAAGAAGTAACCTCCAATCTGCTGACCTGTGATA
ATCTGATATTGGATTGCAATACCCGAAGAGCTAAAAGAGGCAATATAGATATTGATCTTACTGTCAAGGAATATCGTCTG
CTCGAATATTTCATGACTCATCAAGGGGTTGCGCTCTCACGTATCACCCTGCTCAAAGATGTGTGGGACAAGAACTTTGA
TACCAATACCAATATCGTAGATGTTTATGTAAACTATCTCCGGGTAAAGATAGACCGTGACTTTGATAAAAAGCTGATTC
ACACAGTCGTAGGATTAGGATATATCATGAATACTTAA

Protein sequence : 
MMAKILLVEDEINIASFIERGLKEFGHTVTVCHDGNAGWKILQDEPFDLLILDIIMPKINGLELCRLYRQTFGYQSPVIM
LTALGTTEDIVKGLDAGADDYLVKPFSFQELEARIKALLRRNKEVTSNLLTCDNLILDCNTRRAKRGNIDIDLTVKEYRL
LEYFMTHQGVALSRITLLKDVWDKNFDTNTNIVDVYVNYLRVKIDRDFDKKLIHTVVGLGYIMNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-34 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0111 Protein 8e-45 46
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0347 Protein 5e-41 45
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0083 Protein 5e-39 44
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 5e-31 43
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 3e-33 43
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0197 Protein 5e-37 43
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0638 Protein 1e-32 43
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 1e-32 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0308 Protein 6e-38 42
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family BAC0125 Protein 6e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family VFG0596 Protein 2e-34 44
BXY_02390 YP_007791101.1 two component transcriptional regulator, winged helix family VFG1390 Protein 4e-39 41