|
Name : CL2_04920 (CL2_04920) Accession : YP_007788555.1 Strain : butyrate-producing bacterium SSC/2 Genome accession: NC_021016 Putative virulence/resistance : Unknown Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 466040 - 466738 bp Length : 699 bp Strand : + Note : - DNA sequence : ATGAATAAAGCATTAATTTTAGTCGTGGAGGATGACCGGCCAATCCGTAATCTGATCGTGACAACATTAAAAACACATGA TTATAAATATATTACAGCAGAGAATGGAAGTTCAGCTATTTTAGAAGCATCTTCTCATAAACCAGAGATCATTTTATTAG ATCTTGGATTGCCTGATATGGAAGGTGTGGATGTGATCAAAAAAGTAAGAACATGGTCTAACGTACCAATTATCGTTATC AGTGCAAGAAGTGAAGATGTAGATAAAATAGAAGCACTGGATGCAGGAGCAGATGATTATATCACAAAACCATTTTCAGT TGATGAACTGCTTGCAAGGATCAGGGTTACACAGCGCCGATTAGCATTGATCCAGTCAGGCGAGGAACAAGAACAAGCAG TCTTTGTAAATGGAGAGTTAAAGATCGACTATACAGCAGGATCTACATATTTAAAAGATAAAGAATTGCATTTAACACCA ATCGAATATAAATTATTATGTTTGCTGTCTCATAATGTTGGAAAAGTATTGACTCACACTTATATTACGCAACAGATCTG GGGCAGTTCACTGGAAAATGATGTTGCATCACTTAGAGTGTTTATGGCAACATTACGGAAGAAATTACAGCCAGATAAAG ATGGCATGCAGTATATACAGACACATATAGGTATTGGATATCGGATGCTTAAGATATAG Protein sequence : MNKALILVVEDDRPIRNLIVTTLKTHDYKYITAENGSSAILEASSHKPEIILLDLGLPDMEGVDVIKKVRTWSNVPIIVI SARSEDVDKIEALDAGADDYITKPFSVDELLARIRVTQRRLALIQSGEEQEQAVFVNGELKIDYTAGSTYLKDKELHLTP IEYKLLCLLSHNVGKVLTHTYITQQIWGSSLENDVASLRVFMATLRKKLQPDKDGMQYIQTHIGIGYRMLKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 8e-42 | 47 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 4e-41 | 46 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 4e-41 | 46 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 4e-41 | 46 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 4e-41 | 46 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 3e-41 | 46 |
