Gene Information

Name : CL2_28620 (CL2_28620)
Accession : YP_007790660.1
Strain : butyrate-producing bacterium SSC/2
Genome accession: NC_021016
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2851709 - 2854294 bp
Length : 2586 bp
Strand : +
Note : -

DNA sequence :
ATGAACATCAACAAATTTACACAGAAGTCCATTGAGGCAGTCAATCAGTGTGAGAAGATCGCCTACGATCATGGACATCA
AGAGATAGATCAGGAACACTTCTTATATAGCTTGCTTACGATTGATGACAGTCTGATCGCAAGCCTGCTTGAGAAGATGG
GAATTAACAAAGAAACATTTTTAAGCCAGGTACAGGAGTTATTGAATAAGAAACCGAAAGTATCCGGTGGTCAGGTATAT
ATGAGTAATGACTTGAATCAGGTACTTCTTCACGGAGAAGACGAGATGAAAGCCATGAAAGATGAATATGTATCTGTAGA
ACACCTATTCCTTGCAATGATCAAGCATCCAAATAAAGCAGTCAAAGAATTATTCCGTGCCTACGGAATTACAAGAGATC
GTTTCTTACAGGTGTTATCACAGATTCGTGGTGGACAGAAAGTCACAAGTGACAATCCAGAAGAGACATACGACAGTCTT
GAAAAATACGGATATGACCTTGTAAAGAGAGCTAGAGAACAGAAACTAGATCCAGTCATCGGACGTGACAGCGAGATCCG
TAACGTTGTTCGTATCTTATCAAGAAAGACAAAGAATAATCCAGTATTGATCGGTGAACCGGGTGTAGGTAAGACAGCCG
TTGTTGAAGGATTAGCACAGCGAATCGTTCGTGGTGACGTGCCAGACCAGTTAAAAGATAAGACAATTTTTTCACTGGAT
ATGGGATCACTGGTAGCAGGTGCCAAATACCGTGGTGAATTTGAAGAGCGTTTAAAAGCGGTTCTGGAAGAAGTTAAGAA
AAGTGATGGACAGATTATCTTATTTATCGACGAACTTCATACGATCGTCGGTGCAGGTAAGACAGACGGAGCCATGGATG
CGGGAAATATGTTAAAACCAATGCTTGCCAGAGGTGAATTACACTGCATCGGTGCAACAACCTTAGATGAATATCGTCAG
TATATCGAGAAAGACCAGGCATTGGAACGTCGTTTCCAGCCAGTTATGGTCGATCAGCCAACCGTAGAAGATACAATTTC
TATCTTAAGAGGTATCAAAGACAGATATGAAGTATATCACGGTGTTAAGATCACAGATAGTTCCCTGGTAGCTGCAGCAA
CTTTATCAAACCGTTATATCACAGATCGTTTCTTGCCAGATAAAGCCATCGACTTAGTTGATGAAGCATGTGCTATGATC
AAGACAGAGATGAATTCCCTGCCAGCAGAACTGGATGAAGTTCAGAGAAAGATCATGCAGATGGAGATTGAGGAAGCCGC
ACTTAAGAAGGAAGATGACAGATTAAGCAAAGAACGTCTGGAAGAATTACAGAAAGAACTTGCCGAGATGCGAGAAGACT
TCAAAGCAAGAAAAGCAAGATGGGAGAATGAGAAAGCTTCCGTTGAGAAAGTCTCCAAATTAAGAGAAGAGATCGAATCT
GTAAACAGTGAGATCCAGATTGCCCAGAGAAATTATGATTTAAATAAAGCAGCCGAATTACAGTATGGTCGCCTGCCAGA
ATTGAAGAAACAGTTAGAAGAGGAAGAAGAACGCGTAGCGAAAGAAGACCGTTCTATGGTCAGAGAATCCGTCACAGAAG
ATGAGATCGCCAAGATCATTTCCCGTTGGACAGGAATTCCAGTAGCGAAACTTACTGAAAGTGAGAGAAATAAGACCTTA
CATCTTGATAAGATCCTTCATGAAAGAGTTGTTGGACAGGATGAAGCAGTGGAACTTGTTACAGAATCCATCATCCGTTC
CAAAGCCGGAATCAAGGACCCAAGCAAACCAATCGGTTCTTTCTTATTCCTTGGACCAACAGGTGTAGGTAAGACAGAAC
TTGCTAAAGCACTGGCAGAAAGCTTATTTGATAACGAGCAGAATATCGTGCGAATCGATATGAGTGAATATATGGAGAAA
CACTCCGTGGCAAGACTGATCGGAGCGCCTCCGGGATATGTTGGATATGAAGAAGGCGGACAGTTGACTGAAGCAGTCAG
AAGAAAACCTTACTCTGTAGTCTTATTTGATGAGATCGAAAAAGCCCATCCAGATGTATTTAATATCTTATTACAGGTAT
TAGACGATGGACGAATCACAGATTCCAAAGGTAAGACGGTAGACTTTAAGAACACGATTTTGATCATGACATCCAATATC
GGATCTTCCTACCTGTTAGAAGGAATCGATGAAGATGGCAATATCAAACCAGAAGCACAGGATATGGTTATGAATGACCT
TAAGAATCATTTCAGACCAGAATTCTTAAACCGTCTGGATGAAACGATCATGTTCAAGCCATTAACAAAAGCAAATATCA
CAAATATCATTGACTTACTTGTGAAAGATCTGAACCGCAGATTAGCAGACAAAGAATTAAGCGTTGAATTAACATCAGCA
GCCAAGAATTATGTTGCCGACCATGGTTATGAACCAATGTATGGAGCAAGACCATTGAAGAGATATCTGCAGAAGAGTGT
TGAGACACTGGCTGCAAGATTGATCTTGAGCGATGGGGTTGATGCGGAAGATACGATTTTGATCGATGTAGAGAATGATC
AGTTGATTGCGAAAGTGAAATTTTAA

Protein sequence :
MNINKFTQKSIEAVNQCEKIAYDHGHQEIDQEHFLYSLLTIDDSLIASLLEKMGINKETFLSQVQELLNKKPKVSGGQVY
MSNDLNQVLLHGEDEMKAMKDEYVSVEHLFLAMIKHPNKAVKELFRAYGITRDRFLQVLSQIRGGQKVTSDNPEETYDSL
EKYGYDLVKRAREQKLDPVIGRDSEIRNVVRILSRKTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPDQLKDKTIFSLD
MGSLVAGAKYRGEFEERLKAVLEEVKKSDGQIILFIDELHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQ
YIEKDQALERRFQPVMVDQPTVEDTISILRGIKDRYEVYHGVKITDSSLVAAATLSNRYITDRFLPDKAIDLVDEACAMI
KTEMNSLPAELDEVQRKIMQMEIEEAALKKEDDRLSKERLEELQKELAEMREDFKARKARWENEKASVEKVSKLREEIES
VNSEIQIAQRNYDLNKAAELQYGRLPELKKQLEEEEERVAKEDRSMVRESVTEDEIAKIISRWTGIPVAKLTESERNKTL
HLDKILHERVVGQDEAVELVTESIIRSKAGIKDPSKPIGSFLFLGPTGVGKTELAKALAESLFDNEQNIVRIDMSEYMEK
HSVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRITDSKGKTVDFKNTILIMTSNI
GSSYLLEGIDEDGNIKPEAQDMVMNDLKNHFRPEFLNRLDETIMFKPLTKANITNIIDLLVKDLNRRLADKELSVELTSA
AKNYVADHGYEPMYGARPLKRYLQKSVETLAARLILSDGVDAEDTILIDVENDQLIAKVKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL2_28620 YP_007790660.1 ATP-dependent chaperone ClpB VFG2076 Protein 5e-118 43
CL2_28620 YP_007790660.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-113 41