Gene Information

Name : CL2_27880 (CL2_27880)
Accession : YP_007790590.1
Strain : butyrate-producing bacterium SSC/2
Genome accession: NC_021016
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2778141 - 2778857 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAATTAGTAATGGATCTTCCAGAGATCAATGATTATCGTATGGTAGAAGGACTAAACCAGCTAAAGACGAACTT
AGCCTTCTGCGGAAAAGATATTAAAGTGATCACAATGACAAGCAGTGTTCCGAATGAAGGAAAGAGTTCTGTTTCTCTGA
GCCTTTCAAGAACACTTGCAGAAAGTGGAAAGAAGATACTGATGGTGGATGCTGATTTAAGAAAATCAGTAATGGCAGCC
AGATATCATATACAGGGAATCGATAAAGGATTAAGCCATTATCTGACAGGACAGGCAGAAGTGGAGGATATCATCTACGA
GACAGAAGTTGAGGGACTTTGTATTACAGTAGCTGGTCCTCTGACACCAGATCCAACAAGCATTTTGGATTCTGAGCAGT
TTGAACAATTCATTGAGAATGTTAGGGATATGTTTGATTATGTGATCATTGATGCACCACCGCTAGGTGTTGTCATTGAT
GCTGTGATCATCGGTAAATATACAGATGGAGCAGTCATCGTGATCGAGCAGGGAGTGATCAAACGTAAGATCGTTCAAGA
TGTCATCAAGCAGTTGAAGAGGGGCGAGGTTCGTATCCTTGGGGCTGTATTAAATAAAGTTGATGAGCGTATCGGTGCTT
ATGGTAATTATGAGTATAAATATTCATATTCATATTACGGTGAGTCAGATACGGAAAAAAATCACCCAAATACTTAA

Protein sequence :
MKKLVMDLPEINDYRMVEGLNQLKTNLAFCGKDIKVITMTSSVPNEGKSSVSLSLSRTLAESGKKILMVDADLRKSVMAA
RYHIQGIDKGLSHYLTGQAEVEDIIYETEVEGLCITVAGPLTPDPTSILDSEQFEQFIENVRDMFDYVIIDAPPLGVVID
AVIIGKYTDGAVIVIEQGVIKRKIVQDVIKQLKRGEVRILGAVLNKVDERIGAYGNYEYKYSYSYYGESDTEKNHPNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL2_27880 YP_007790590.1 capsular exopolysaccharide family VFG1349 Protein 3e-38 42