Gene Information

Name : CL2_27780 (CL2_27780)
Accession : YP_007790580.1
Strain : butyrate-producing bacterium SSC/2
Genome accession: NC_021016
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2767081 - 2768274 bp
Length : 1194 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGAAAAAAGACGGGATAGTAAAGGACGTATCCTGCATACTGGAGAGAGCCAACGAACAGACGGAAAATACTTATA
TAAATATGTGGACGCATTTGGAAACACAAAATATGTGTATGCTTGGAGATTGACACCCACAGACCCGACACCAAAGGGAA
AACGGGAAAAACCCTCACTTCGTGAACTGGAACAGCAGATAAGACGGGATATTGAGGACGGTATCGACAGCACAGGCAAG
AAAATGACGCTTTGCCAACTCTACGCCAAACAGAACGCACAGAGGGCAAATGTGAAGAAAAGCACACAGAAACAACGGGA
ACAACTCATGCGGTTATTGAAAGAGGACAAGTTAGGTGCTAGGAGCATTGATACGATAAAACCCTCTGACGCTAAAGAAT
GGGCGTTACGCATGAAAGACAAAGGCTTTTCCTATAACACTATTAACAACCATAAACGCTCGTTAAAAGCGTCATTCTAT
ATCGCCATACAAGACGATTGTGTAAGGAAAAACCCTTTTAATTTCAAGTTAAGTGAAATCATAGAAAATGATACCAAAGA
GAAAGTAGCATTAACAGAGGAACAGGAACAAGCCTTACTGTCATTCATCAAGACGGATAACGTGTATCACAAGTATTATG
ATGATGTGCTGATACTGTTAAAGACAGGACTTCGTATCTCGGAACTGTGCGGACTAACAATCATGGACATTGATTTTATC
CATGAAGTTGTGGTTATCAACCATCAGTTATTAAAGAGCAAGGAACAGGGCTATTATATTGAAACGCCTAAGACAAAAAG
CGGAACAAGGCAAGTGCCATTAAGTAGAGAAACGATACAGGCATTTCAACGGGTTATAAAGAAACGCCCAAAGGCAGAAC
CATTTGTGATAGACGGACGAGGCAACTTTCTATTTGTCAATCATAAAGGCAAGCCCAAAGTTGCGATTGATTACAATATG
CTTTTTGTCCGTATAGTAAAGAAATACAACAAGCACCATAAGGATAACCCTTTGCCACATATCACACCACATACGCTACG
CCATACATTCTGCACAAGATTGGCAAGCAAGAACATGAACCCGAAAGATTTACAGTATATCATGGGACATTCAAACATCA
GTATCACAATGAACTGGTATGCTCATGCGTCCATAGATACCGCAAAATCAGAGGTTCAGCGTCTAATTGCATAA

Protein sequence :
MKEKRRDSKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSLRELEQQIRRDIEDGIDSTGK
KMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGARSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFY
IAIQDDCVRKNPFNFKLSEIIENDTKEKVALTEEQEQALLSFIKTDNVYHKYYDDVLILLKTGLRISELCGLTIMDIDFI
HEVVVINHQLLKSKEQGYYIETPKTKSGTRQVPLSRETIQAFQRVIKKRPKAEPFVIDGRGNFLFVNHKGKPKVAIDYNM
LFVRIVKKYNKHHKDNPLPHITPHTLRHTFCTRLASKNMNPKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 1e-124 63
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 1e-124 63
int YP_008394266.1 integrase Not tested Not named Protein 2e-130 62