Gene Information

Name : CL2_27340 (CL2_27340)
Accession : YP_007790541.1
Strain : butyrate-producing bacterium SSC/2
Genome accession: NC_021016
Putative virulence/resistance : Virulence
Product : Predicted nucleoside-diphosphate sugar epimerases
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2720657 - 2722534 bp
Length : 1878 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAATTAAAAACAATCGCTCAAAGAAAAAAATGGAATATGATACTTGGGATCTCAGATATCATAATGATGATCAT
AGCATCATATCTTGCATTATTAACGCGATTTGAATTCTATCCATCACAGATCGCACCGATTTTTTTGAAAAATGCTGCAA
AATACATGCCGTTGAATCTCTTTTGCAGTATTGTGATCTTTATGGCATATCGATTGTATTCAACGCAATGGAAGTATGCA
GGAATCTCCGATTTTATTAATGTCGTTAAAGCAGTTGTGATCGCAGCAGCTTTCCAGCTGATCGGAATTTATATGTTACA
ATGGGAGATACCAAGAAGTTATTATTTCTTGTATTTGGTATATCTGCTGTTGGGAATGTTTTTTATCCGATTACTTGTCC
GATTGATTCAGGGAAGTGAACCACTCAAAGTGAATGACATTGGCAAGAAGAAAGTTCCGGTAATGTTGATCGGAGCAGGA
GAAGCAGGAAGCATCATTTTAAATGAGATCAAAAAGAGTACATATGTGACTAAAACGATCCGTTGCATCATAGATGATGA
TCCAGCGAAGAAAGGAACATATTTATCTGGGATACCAGTGGTTGGCAATCGTAATACGATCCTGCGCAATGCAGTTAAAT
TTGATGTTGAAGAGATCATTCTGGCAATTCCGACAATAGAACCCAAGGATCGCAAGGACATCCTTGAAATCTGCAAGCAG
ACAGGATGCCGTCTGAGTATTCTTCCGGGCTTATATCAGCTGATCAACAGTGAAGTTACAGTATCTGCTCTAAGAGAAGT
AGAGATTGAAGATCTGCTTGGAAGAGAGCCAGTGAAAGCCAATCTTCCATCAATCATGAGCTATGTCAAAGACAGAGTCG
TATTTGTCACAGGGGGAGGCGGATCGATCGGAAGTGAGATCTGCAGACAGATCGCAAGATATCAGCCGAAGAAGTTAGTG
ATCATTGATAATTATGAGAACAACGCCTACGAGATCCAGATGGAATTAAAGAGAACACATCCAGAACTAGATCTGAAAGT
ATTGATCGTATCTGTCCAGAATCATCTGCGAATACACAATATTTTCGAAGATTATAAGCCTGATATCGTATTTCATGCAG
CAGCACATAAGCATGTGCCATTGATGGAAGATAGCCCGCATGATGCGATCAAGAACAATGTATTTGGTACATTTAACATA
GCCAAAGAAGCAGGAATGAGCGGCGTAAAGAGAATGGTACTGATCTCCACGGATAAGGCAGTAAGACCGACAAATATCAT
GGGCGCTTCCAAGCGGATCTGTGAGATGGTCATTCAATACATGAACAGCTTATACGATACAGAATACGTTGCTGTAAGAT
TTGGAAATGTTCTTGGAAGTAACGGAAGTGTCGTTCCGTTGTTCAAGAAGCAGATTGCCAATGGTGGTCCGGTAACAGTT
ACACATCCAGAGATCATCCGATACTTTATGACGATCCCAGAAGCCGTCAGTCTGGTGTTAGAAGCAGGAGCTTACGCAGA
AGGCGGGGAAATATTTATCCTTGATATGGGAGAACCAGTCAAGATCTTAGATCTTGCGAAGAATATGATCCGTTTATCAG
GACTTACACCAGGAGAAGATATAGAAATCCAGTTTACTGGCTTAAGACCAGGGGAGAAGCTGTATGAAGAACTTCTGATC
GATGAGGAGAATAAAAAAGAGACAAAGAACAAACGAATTTTCATTGGAAGTCCAAGGATGATGGAGACAGAACAATTTAG
TGAACTGATCGCTGAATTAGATCATGCGGCATTTTCCGAAGATCCGAATATTCGTGAAGTTGTAAAAAGATTAGTTCCAG
AGTATACATATAAACAGACAAATCAACAGACAAAATGA

Protein sequence :
MKKLKTIAQRKKWNMILGISDIIMMIIASYLALLTRFEFYPSQIAPIFLKNAAKYMPLNLFCSIVIFMAYRLYSTQWKYA
GISDFINVVKAVVIAAAFQLIGIYMLQWEIPRSYYFLYLVYLLLGMFFIRLLVRLIQGSEPLKVNDIGKKKVPVMLIGAG
EAGSIILNEIKKSTYVTKTIRCIIDDDPAKKGTYLSGIPVVGNRNTILRNAVKFDVEEIILAIPTIEPKDRKDILEICKQ
TGCRLSILPGLYQLINSEVTVSALREVEIEDLLGREPVKANLPSIMSYVKDRVVFVTGGGGSIGSEICRQIARYQPKKLV
IIDNYENNAYEIQMELKRTHPELDLKVLIVSVQNHLRIHNIFEDYKPDIVFHAAAHKHVPLMEDSPHDAIKNNVFGTFNI
AKEAGMSGVKRMVLISTDKAVRPTNIMGASKRICEMVIQYMNSLYDTEYVAVRFGNVLGSNGSVVPLFKKQIANGGPVTV
THPEIIRYFMTIPEAVSLVLEAGAYAEGGEIFILDMGEPVKILDLAKNMIRLSGLTPGEDIEIQFTGLRPGEKLYEELLI
DEENKKETKNKRIFIGSPRMMETEQFSELIAELDHAAFSEDPNIREVVKRLVPEYTYKQTNQQTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-90 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL2_27340 YP_007790541.1 Predicted nucleoside-diphosphate sugar epimerases VFG1300 Protein 3e-88 47
CL2_27340 YP_007790541.1 Predicted nucleoside-diphosphate sugar epimerases VFG0029 Protein 2e-78 43