Gene Information

Name : CL2_23900 (CL2_23900)
Accession : YP_007790242.1
Strain : butyrate-producing bacterium SSC/2
Genome accession: NC_021016
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2373238 - 2373903 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATTTTACAAACAATCGACTTAAAGAAGTATTACGGCACAGAACCAAATATTACTCGTGCCCTTAATGGTGTAAA
TTTTACTGTGGAACAGGGAGAATTTGTTGCCGTAGTTGGAACTTCCGGCAGCGGTAAGTCTACATTGCTTCACATGATGG
GAGGACTTGATACCCCCACTTCCGGCAGCGTGATTGTACGGGGAGAAGAACTCGCAAAAAAGAATGATGATGAATTGACA
ATTTTCCGCCGTCGTAACATCGGATTTATCTTCCAAAATTATAATCTGGTTCCGATTTTGAATGTATATGAAAATATCGT
CCTGCCTGTGGAACTGGATGGCGATACAGTAGACCAGAAATTTATGGACGAAGTTGTGTATATGTTGGCTTTAGAAGATA
AACTGGAAAATATGCCGAACAATCTTTCAGGCGGTCAACAGCAACGTGTAGCGATTGCACGAGCTTTAATTACGAAGCCT
GCGATTATCCTTGCTGATGAACCGACCGGAAATCTTGATAGCAAGACCAGTGCAGATGTGTTAGGGCTTTTGAAGCATAC
CAGCGGAGAATTTAATCAGACCATTGTAATGATTACTCACAACAACGAGATCGCTCAACTCGCAGACCGCATTGTACGGA
TTGAAGATGGTAAAATTGTTGGCTAA

Protein sequence :
MSILQTIDLKKYYGTEPNITRALNGVNFTVEQGEFVAVVGTSGSGKSTLLHMMGGLDTPTSGSVIVRGEELAKKNDDELT
IFRRRNIGFIFQNYNLVPILNVYENIVLPVELDGDTVDQKFMDEVVYMLALEDKLENMPNNLSGGQQQRVAIARALITKP
AIILADEPTGNLDSKTSADVLGLLKHTSGEFNQTIVMITHNNEIAQLADRIVRIEDGKIVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL2_23900 YP_007790242.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 1e-84 80
CL2_23900 YP_007790242.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 3e-58 55
CL2_23900 YP_007790242.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-36 44
CL2_23900 YP_007790242.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 3e-36 41