Gene Information

Name : RTO_08720 (RTO_08720)
Accession : YP_007786082.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 875344 - 876027 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :

ATGGATATAATCAAAGCCATGAATCTAAAAAAATATTACACATCTGATACATATGAAGTGCGTGCCTTAGATGGTGTGTC
ATTAACGGTGGAAGAGGGTGAATTTATAGCGGTTGTTGGTACGTCCGGATGTGGAAAGACAACACTTATGAACATGTTAG
GAGGTCTTGACATTCCGGATTTTGGAGGTGTCTGGATCAGAAATACAAGTTTAAAAGATCTTAACAAGGAAGAAAGAACA
ATATTCAGAAGAAGAAATATCGGATTTGTATTCCAACAATACAATTTAATTCCTTCGCTTAGTATACGCGAAAACATAGT
TCTTCCGATGCGACTTGACGGAAAGGAAATCGATATAGATTTCTTTAATGGAATTGTAGAAATACTTGGATTAAAAGATA
AATTAGAACGTTTTCCATCAACACTGTCCGGTGGACAGCAACAGAGAGTTTCTATAGCACGGGCATTGTTGACGAAACCG
GCAATTGTCCTGGCGGATGAACCGACCGGAAATCTGGATTCTGTTACAAGTATGGAAGTCGTAGGATTACTAAAATCCTG
TGCTGCAAGATTTCATCAGACGACATTGATCGTGACGCATCAAGAAGAGGTCGCACAGATGGCAGACAGAGTAATACGTA
TGTCTGATGGGAAAATCTATACAAGAGATTGTAACGATTGTTAG

Protein sequence :

MDIIKAMNLKKYYTSDTYEVRALDGVSLTVEEGEFIAVVGTSGCGKTTLMNMLGGLDIPDFGGVWIRNTSLKDLNKEERT
IFRRRNIGFVFQQYNLIPSLSIRENIVLPMRLDGKEIDIDFFNGIVEILGLKDKLERFPSTLSGGQQQRVSIARALLTKP
AIVLADEPTGNLDSVTSMEVVGLLKSCAARFHQTTLIVTHQEEVAQMADRVIRMSDGKIYTRDCNDC

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	1e-31	41
Spaf_1862	YP_006310627.1	amino acid ABC transporter ATP-binding protein	Not tested	FWisland_2	Protein	1e-24	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RTO_08720	YP_007786082.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-66	62
RTO_08720	YP_007786082.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	5e-50	48
RTO_08720	YP_007786082.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	1e-29	43
RTO_08720	YP_007786082.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-36	42