Gene Information

Name : RTO_08290 (RTO_08290)
Accession : YP_007786040.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 835147 - 835842 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGGCAATTCAGAGAGTTATGTTGACAGATTCCAGAAAAGAAGATGTCTTCTATGAAGAGGCTATTAAAACCCTCCGTAC
AAATATGCAGTTCAGTGGTGTAGAGACGAAGAGTATTGTTCTCACAAGCTGTTATCCAAATGAAGGAAAAAGTGACGTGG
CTTTCCAGCTTGCAGTAGAGATTGGAAAGATGGGAAAGAGAGTTCTGATCATAGATGCAGATATTCGTAAGTCCAGTTAT
ATCAAACGTTACCAGGTTAAACAAAAGACCAACGGACTGTCACAGTATTTAAGTGGACAGATTTCTTTAGAAGAAATAAT
TTATTCTACCAATTACCGTAATCTTGAGATTATCTTTTCAGGTCCGTATGCTCCGAACCCGTCAGAGCTTCTGGAGCAGG
GACGTTTCGGCAGATTGATCGAAGAGACAAGGAAAGTTTATGATTATATTTTGATTGATACACCACCGATCATCAGTATG
AGTGATGCAGCAATCGCAGCAAAACAATGTGATGGAGCAATCCTCGTAATCGAGAGCGAAGCAGTAAGCAGAAGAGATGC
AATGAAAGCAAAAGAACAGCTTACAAAGAGTGGATGTAAGATTCTCGGTGCAGTACTGAATAAAGTGGATATGAAGAAAG
AAAAATACTATAGTAAGTATAGTTCATACTACTACGGTAAAAGCAAACAGGAATAG

Protein sequence :
MAIQRVMLTDSRKEDVFYEEAIKTLRTNMQFSGVETKSIVLTSCYPNEGKSDVAFQLAVEIGKMGKRVLIIDADIRKSSY
IKRYQVKQKTNGLSQYLSGQISLEEIIYSTNYRNLEIIFSGPYAPNPSELLEQGRFGRLIEETRKVYDYILIDTPPIISM
SDAAIAAKQCDGAILVIESEAVSRRDAMKAKEQLTKSGCKILGAVLNKVDMKKEKYYSKYSSYYYGKSKQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 1e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTO_08290 YP_007786040.1 capsular exopolysaccharide family VFG1349 Protein 2e-33 41