|
Name : RTO_30330 (RTO_30330) Accession : YP_007787945.1 Strain : [Ruminococcus] torques L2-14 Genome accession: NC_021015 Putative virulence/resistance : Resistance Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 3130232 - 3130924 bp Length : 693 bp Strand : + Note : - DNA sequence : ATGAGTAAACGTATTTTAATCGTAGAAGACGAGGAAAGCATTGCAGATCTTGAGAAAGACTATCTGGAGCTGAGTGGTTT TGAAGTCGAGGTTGCGAATGATGGTGAGATAGGACTTAAGAAAGGACTTGAAGGAGAATTTGATCTGATCATTCTGGATC TGATGCTTCCGGGAGTAGATGGATTTGAGATCTGTCGTCAGATCCGCAGCCAGAAGAATACACCGATCATTATGGTTTCA GCAAAGAAAGATGATATTGATAAGATTCGAGGGCTTGGACTTGGCGCAGATGATTATATGACAAAACCGTTCAGCCCAAG TGAACTTGTAGCGCGTGTGAAAGCACATCTTGCAAGATATGAGAGACTGATCGGAAGTAATGTAGAGCAGAATGAAGTGA TCGAGATCCGTGGATTGAAGATCGATAAGACAGCACGTCGCGTGTGGGTGAATGGAGAAGAGAAGTCTTTCACAACGAAA GAATTTGACCTTTTAACTTTCCTTGCAGGACATCCGAATCATGTGTACAGCAAGGAAGAACTTTTCCGTGAGATCTGGGA TATGGAGTCGATTGGAGACATTGCAACTGTTACAGTACATATTAAGAAGATCCGTGAGAAGATCGAATATGATACTTCAC ATCCACAGTATATTGAGACAATCTGGGGTGTGGGATACAGATTTAAAGTATAA Protein sequence : MSKRILIVEDEESIADLEKDYLELSGFEVEVANDGEIGLKKGLEGEFDLIILDLMLPGVDGFEICRQIRSQKNTPIIMVS AKKDDIDKIRGLGLGADDYMTKPFSPSELVARVKAHLARYERLIGSNVEQNEVIEIRGLKIDKTARRVWVNGEEKSFTTK EFDLLTFLAGHPNHVYSKEELFREIWDMESIGDIATVTVHIKKIREKIEYDTSHPQYIETIWGVGYRFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0907 | YP_001198273.1 | NisR | Not tested | 89K | Protein | 5e-26 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | FJ349556.1.orf0.gene | Protein | 6e-43 | 46 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | HE999704.1.gene2815. | Protein | 2e-40 | 46 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007793.3914065.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002758.1121390.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_010079.5776364.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002952.2859858.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007622.3794948.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_003923.1003417.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_013450.8614146.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002951.3238224.p0 | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AM180355.1.gene1830. | Protein | 6e-42 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AF155139.2.orf0.gene | Protein | 1e-43 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_012469.1.7685629. | Protein | 7e-36 | 45 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_014475.1.orf0.gen | Protein | 6e-42 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_005054.2598277.p0 | Protein | 6e-42 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002952.2859905.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007622.3794472.p0 | Protein | 3e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_003923.1003749.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002745.1124361.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_009782.5559369.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002951.3237708.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_002758.1121668.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_009641.5332272.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_013450.8614421.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_007793.3914279.p0 | Protein | 2e-38 | 44 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AE015929.1.gene1106. | Protein | 1e-30 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_011595.7057856.p0 | Protein | 5e-37 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_010400.5986590.p0 | Protein | 3e-36 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_010410.6002989.p0 | Protein | 5e-37 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | EU250284.1.orf4.gene | Protein | 6e-40 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AF130997.1.orf0.gene | Protein | 1e-37 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | DQ212986.1.gene4.p01 | Protein | 1e-38 | 43 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | NC_012469.1.7686381. | Protein | 1e-36 | 42 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AF162694.1.orf4.gene | Protein | 6e-38 | 42 |
| RTO_30330 | YP_007787945.1 | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | AE000516.2.gene3505. | Protein | 2e-35 | 41 |
