Gene Information

Name : RTO_26670 (RTO_26670)
Accession : YP_007787636.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2785894 - 2786592 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :

ATGTTTTTATCCTTAACTAATATCAAAAAATCTTTTGGACAAGGCGACAGTCGTGTAGAAGTCTTAAAAGGCATTGATCT
ATTGATTAAAAAGGGAGAATTCTGTGTTCTTCTTGGACCTTCCGGCTCGGGAAAATCAACTTTATTGAATATCATCGGTG
GCATTGACCGTGCGGACAGTGGTCAGATCATAATTGAAGACGAACTGATGGAAAAAATGACTGCAAAACGTCTTAGTCAA
TACCGAAGAAAACATCTTGGATATGTTTTCCAGATGTATAATCTGATTCCCAATCTTACTGTGCGCGAAAATATTGAAGT
CGGTGCTTACTTAAGTGATCACGCGTTAGATGTAGATGAACTTCTTGATACCCTTGGTCTTTCTGCACATCAGAAGAAGC
TGCCGAATCAGCTCTCTGGTGGCCAGCAACAGCGTACTGCCATTGGCAGGGCGATTATTAAAAATCCTGATATTCTGCTC
TGTGATGAGCCAACCGGTGCGCTTGATTATAAAACGTCGAAAGAAATACTGAAGCTGATTGAAACAGTCAATCAAAAATA
CGGCAATACAGTTGTAATGGTAACGCACAACGATGCGATCAAAGATATGGCAGACCGCGTTGTCCGGATTCGTGACGGTA
TGATACGAAAAAATTATCTGAACGATCATAAGGTCAGTGCACAGGAACTCGACTGGTAA

Protein sequence :

MFLSLTNIKKSFGQGDSRVEVLKGIDLLIKKGEFCVLLGPSGSGKSTLLNIIGGIDRADSGQIIIEDELMEKMTAKRLSQ
YRRKHLGYVFQMYNLIPNLTVRENIEVGAYLSDHALDVDELLDTLGLSAHQKKLPNQLSGGQQQRTAIGRAIIKNPDILL
CDEPTGALDYKTSKEILKLIETVNQKYGNTVVMVTHNDAIKDMADRVVRIRDGMIRKNYLNDHKVSAQELDW

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	46
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-40	45
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	6e-40	45
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-40	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RTO_26670	YP_007787636.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	3e-45	44
RTO_26670	YP_007787636.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-42	43
RTO_26670	YP_007787636.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	5e-47	42
RTO_26670	YP_007787636.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	5e-37	42
RTO_26670	YP_007787636.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	9e-34	41