Gene Information

Name : RTO_22770 (RTO_22770)
Accession : YP_007787285.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2356586 - 2359030 bp
Length : 2445 bp
Strand : +
Note : -

DNA sequence :
ATGCAGATTTCATATACAAAGTCGGCGCAGCATGCGCTTAAGTATGCGGCTAGAGCTGCCAGAGAGATGAAGCATCCGTA
TATCGGAACAGAACATTTGCTTCTGGCATTGAGAGAAGAATATACAGGAGTGGCAGGACAGGTACTTGCGAACAGTGGAG
TAGAGTCGGAGAAGATCCTGAAGTTGATGGATGAGCTGATCACTCCGGCAGAAGAACATCCGGCAGCGAAAGGAAAGAGA
TTAGAAGAGAGTCCGAGACTCCAGTATCTGTTAGAGAACAGCGCGAAGGAGTGTAAAAGACTCCGTACAACGGAAATCGG
AACAGAACATCTCCTTCTTGCGATGATACGTGATGTGGATTGTGTGGCAGCAAAGATTCTGATCACATTGAATGTGAATC
TTCAGAAATTATTCCAGAGCATTATGAATGCAGCAGGGATCGATCCGAAGATCTATCAGGAAGAACTTCAGGAGGATAAT
CGCGGAAGCGGTGCGATGATGGAGCAGTACTGTACAGATCTGACAGAACGTGCGGCAGAAGGAAAAATGGATCCGGTTGT
GGGAAGAAACCAGGAAATTTACCGTCTGATGGAGATTTTAAGCCGAAGAACAAAGAACAACCCATGTCTGGTTGGAGAAC
CGGGAGTTGGTAAGACAGCAATTATTGAAGGTTTAGCACAGAGAATCGCATCCGGTGTGGTTCCGGAGAAGATGAAAGAT
AAGAAGATTTACAGTCTGGATCTTCCGGGACTGATCGCTGGTTCAAAGTACCGTGGTGAGTTTGAAGAGCGTATGAAAGG
CCTGATCTCAGAAGTAGAAGCCTGTGGAAATGTGATTCTGTTCCTTGATGAGATCCATACGATGATCGGTGCCGGAGGCG
CAGAAGGAGCGATTGATGCATCCAGCATTCTGAAACCTTCACTGGCGAGAGGTGAGATGCAGCTGATCGGTGCAACTACG
ATTGCAGAATATCGGAAGTACATTGAGAAAGATGCAGCACTTGAGCGAAGATTCCAACCGGTGACGATTGAAGAGCCGAC
ACAGGATCAGTGTATTGAGATCTTAAAAGGTCTGAAAGAGAAATACGAAGCGCATCATAAAGTTGTGATCGAAGAACAGG
CACTGGAGTCAGCAGTACAGCTGTCAGAGCGTTACATCACAGACCGGAATCTTCCAGATAAGGCGATTGATGTTTTAGAT
GAAGCATGCTCAAAGGTGAGTCTGAAGGGATATGAGGTTCCAGAGAATCTGAAGCAGTTAGAACAGGCAGTGAAAGAACT
TGCTTCGCAGAAGGAAGAGAGCATTGAACGGGGAGATTTTGCAGAAGCGTCCCTGATTCAGAAAGAACAGGATGCAGTGC
AGAAGAAATTAGACTCAGTGAAGAAACGCTTTGAGAAGAAACAGGCGAAGGCCAACCCACCGGTAACTGTAGATGCGGTT
GCAGAAGTGGTGTCTGCCTGGACAAAAGTACCGGTGAGTAAGCTCGCAGAGAGTGATGCCCAGCGTCTGAAGAATCTGGA
GAATGTCCTTCAGAAGAGAGTGATCGGACAGGATGAGGCTGTCGGCGCAGTTGCAAGAGCCGTGAAGAGAGGAAGAGTCG
GACTGAAAGATCCGAAGCGCCCGATCGGTTCCTTCCTGTTCCTGGGACCAACCGGTGTTGGTAAGACAGAATTATCAAAA
GCACTGGCAGAAGCATTATTTGGGAAAGAAGATGCAATGATCCGTGTTGATATGTCAGAATATATGGAGAAACATTCCGT
TTCCAAGATGATCGGATCTCCTCCGGGATATGTCGGTCATGAAGAAGGTGGACAACTCAGTGACCAGGTGCGTACACATC
CATATTCCGTGATTCTGTTTGATGAGATTGAGAAAGCACATCCGGATGTATTCAATGTACTTCTTCAGGTGCTGGATGAT
GGGCATATTACAGATTCTCAGGGGAGAAAGGTTGACTTTTCTAATACTGTAATCATTATGACATCAAATGCAGGTGCGAA
AGCAATTGTTGAACCGAAGAAGCTAGGATTTGCGACAAAAGAAGATCCGGCGAGTGATTATAAGAAGATGAAGCAGAATG
TGATGGACGAAGTGAAACAGATCTTCCGTCCGGAATTCCTGAACCGAATTGATGAGATTATTGTATTCCATTCGCTCGGC
AAAGAAGAGATGAAGAAAATCGTTTCTTTATTATGCAATCAGTTTACTAAACGTCTGGAATCACAGATGAATATTCATCT
GAAACTGCGTGAATCTGCGAAGGCTCTCATTGTGGAGAAAGGAACGGATGCGAAGTACGGAGCAAGACCACTGCGCCGTG
CATTGCAGACAGAACTGGAGGATAAGCTGGCAGATGCGATCCTGAACGGAGAGATTCAGGAAGGGGATCATGTGGCAGCA
GGAGCATCCAAAAAGGGAATTCATTTTGTGAAGACAGAATCTTAA

Protein sequence :
MQISYTKSAQHALKYAARAAREMKHPYIGTEHLLLALREEYTGVAGQVLANSGVESEKILKLMDELITPAEEHPAAKGKR
LEESPRLQYLLENSAKECKRLRTTEIGTEHLLLAMIRDVDCVAAKILITLNVNLQKLFQSIMNAAGIDPKIYQEELQEDN
RGSGAMMEQYCTDLTERAAEGKMDPVVGRNQEIYRLMEILSRRTKNNPCLVGEPGVGKTAIIEGLAQRIASGVVPEKMKD
KKIYSLDLPGLIAGSKYRGEFEERMKGLISEVEACGNVILFLDEIHTMIGAGGAEGAIDASSILKPSLARGEMQLIGATT
IAEYRKYIEKDAALERRFQPVTIEEPTQDQCIEILKGLKEKYEAHHKVVIEEQALESAVQLSERYITDRNLPDKAIDVLD
EACSKVSLKGYEVPENLKQLEQAVKELASQKEESIERGDFAEASLIQKEQDAVQKKLDSVKKRFEKKQAKANPPVTVDAV
AEVVSAWTKVPVSKLAESDAQRLKNLENVLQKRVIGQDEAVGAVARAVKRGRVGLKDPKRPIGSFLFLGPTGVGKTELSK
ALAEALFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSDQVRTHPYSVILFDEIEKAHPDVFNVLLQVLDD
GHITDSQGRKVDFSNTVIIMTSNAGAKAIVEPKKLGFATKEDPASDYKKMKQNVMDEVKQIFRPEFLNRIDEIIVFHSLG
KEEMKKIVSLLCNQFTKRLESQMNIHLKLRESAKALIVEKGTDAKYGARPLRRALQTELEDKLADAILNGEIQEGDHVAA
GASKKGIHFVKTES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RTO_22770 YP_007787285.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 54
RTO_22770 YP_007787285.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 8e-143 49