Gene Information

Name : RTO_01880 (RTO_01880)
Accession : YP_007785486.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 171108 - 171521 bp
Length : 414 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAGTAATTTTGATAGGACGTTTAACAAGAGAGCCGGAAGTGAGATATTCACAAGGAGAGAATGCAAGTGCGGT
TGCCAGATATACATTGGCAGTTGACCGTCGGTTTAAGAGAGAGGGAGATGCAACGGCGGATTTTATCAGTTGTGTATGCT
TTGGTAAGCTGGCAGAATTTGCAGAGAAGTATTTACATCAGGGCGTAAAGATTGCTGTGACTGGACGTATCCAAACAGGA
AGTTATACGAATAAAGACGGTGTGAAAGTTTACACAACAGATGTTGTTGTAGAAGAACAGGAATTTGCTGAGAGTAAAAA
AAGCCAGGGATATGGCATGAACGAAGAAGGTCCTGCAGGGGATGGATTTATGAATGTTCCGGATGGAATTGATGAAGAAC
TTCCATTCTCATAA

Protein sequence :
MNKVILIGRLTREPEVRYSQGENASAVARYTLAVDRRFKREGDATADFISCVCFGKLAEFAEKYLHQGVKIAVTGRIQTG
SYTNKDGVKVYTTDVVVEEQEFAESKKSQGYGMNEEGPAGDGFMNVPDGIDEELPFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 1e-36 57
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-20 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-20 46
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-19 46
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 8e-20 46
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-20 46
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 5e-20 46
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-18 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-18 45
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 9e-18 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 4e-14 43
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 6e-14 43
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 7e-18 43