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Name : RTO_16110 (RTO_16110) Accession : YP_007786711.1 Strain : [Ruminococcus] torques L2-14 Genome accession: NC_021015 Putative virulence/resistance : Unknown Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 1676639 - 1677340 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGAATAAGTCACTAATATTAGTTGTAGAAGATGACACATCTGTCAGAAATTTAATTACAACAACCTTAAAAACGCACGA ATATCGATATCTGACGGCACCCGATGGTCAATCGGCAATTTTAGAAACATCTTCACACAATCCTGACATTGTTTTACTTG ATTTAGGACTTCCTGATATAGACGGTGTTGAGATTATTAAAAAAATCCGTACTTGGTCAAATATGCCAATTATCGTAATT AGTGCTCGCAGTGAAGATACCGATAAAATTGATGCGTTGGATGCTGGCGCAGATGATTATTTAACAAAGCCATTTTCTGT TGAGGAACTGCTTGCCAGACTACGAGTCACGCAAAGAAGGTTATCGATGATGCAAAAAGTATCCCCTGCTGAAGCGGTTG TTTTTGTAAACGGAAAACTTCGTGTAGATTATGCTGCAGGTTGTGCTTATTTGAATGAAGAAGAGTTGCATTTAACACCT ATTGAATATAAGTTGCTTTGCCTGTTGACAAGAAATATAGGAAAAGTTCTGACCCATACTTTCCTTACGCAAAGCATTTG GGGAAGTAGTTGGAATAATGATATTGCTTCCCTTCGTGTGTTTATGGCAACACTTCGTAAAAAAATTGAGAAAGAACCAA ACTCTCCACAATATATCCAAACACACATTGGCGTGGGGTATCGGATGCTGAAAGTTGATTGA Protein sequence : MNKSLILVVEDDTSVRNLITTTLKTHEYRYLTAPDGQSAILETSSHNPDIVLLDLGLPDIDGVEIIKKIRTWSNMPIIVI SARSEDTDKIDALDAGADDYLTKPFSVEELLARLRVTQRRLSMMQKVSPAEAVVFVNGKLRVDYAAGCAYLNEEELHLTP IEYKLLCLLTRNIGKVLTHTFLTQSIWGSSWNNDIASLRVFMATLRKKIEKEPNSPQYIQTHIGVGYRMLKVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 8e-43 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 8e-42 | 43 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 1e-41 | 43 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 1e-41 | 43 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 1e-41 | 43 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 1e-41 | 43 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 8e-43 | 42 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 1e-42 | 42 |
