Gene Information

Name : RTO_13390 (RTO_13390)
Accession : YP_007786474.1
Strain : [Ruminococcus] torques L2-14
Genome accession: NC_021015
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1372439 - 1373113 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :

ATGAGTGTGATATTAGAAACCAAGCAGCTTTGTAAGTTTTATGGCGCAGGTGAGAATCAGGTCAAAGCGGTCAATCAGGT
GGACATTCAGATTGAGCAGGGAGAATTTGTCGCAATTGTTGGAAAGTCAGGTTCCGGTAAAAGTACATTACTTCATATGC
TTGGAGGGCTAGACACCCCGACAAAAGGCAGTGTTACTTTAGCAGGGAAAGATTTATACAGGATGAAGGAAGATGCCCTT
GCTGTTTTCCGCAGAAGAAAAATCGGATTTGTTTTTCAGGCATTTAATCTGGTTTCATCTGTTAATGTCTGGGAAAATAT
TGTACTGCCACTGGGGCTGGATGGAAGAAAAGTGGATGAAGCGTATGTAAATGATATTATTGCAACTCTGGGGATTGAAA
AGAGGATTTATAATCTGCCAAATCAGTTATCCGGAGGACAGCAGCAGAGAGTAGCAATTGCAAGAGCACTGGTGAATCGT
CCGGAAATTATATTTGCAGATGAGCCGACAGGAAATCTTGATTCTAAGACCAGTGATGAGGTAATCGCTCTGCTTAAGAT
GACAGCAAAAAAATATGGACAGACAATTGTAATGATTACCCATGATGACGAAATTGCACAGGTCGCTGACCGTATTCTGG
TGATTGAGGACGGACAGGTGGTGGATTTCAGATGA

Protein sequence :

MSVILETKQLCKFYGAGENQVKAVNQVDIQIEQGEFVAIVGKSGSGKSTLLHMLGGLDTPTKGSVTLAGKDLYRMKEDAL
AVFRRRKIGFVFQAFNLVSSVNVWENIVLPLGLDGRKVDEAYVNDIIATLGIEKRIYNLPNQLSGGQQQRVAIARALVNR
PEIIFADEPTGNLDSKTSDEVIALLKMTAKKYGQTIVMITHDDEIAQVADRILVIEDGQVVDFR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-38	47
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-40	46
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	6e-40	46
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-40	46

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RTO_13390	YP_007786474.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	4e-67	63
RTO_13390	YP_007786474.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	1e-58	55
RTO_13390	YP_007786474.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	2e-40	46
RTO_13390	YP_007786474.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	6e-34	46