Gene Information

Name : CK1_06770 (CK1_06770)
Accession : YP_007782610.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Unknown
Product : conserved hypothetical protein TIGR00246
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 583237 - 583716 bp
Length : 480 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATAAGTATCCTGACAGTAGGGAAGATCAAGGAAAAATATCTGCGGGATGCCATTGCGGAGTATTCCAAGCGCCT
CGGGCGTTACTGCAAGCTGGAGATCATAGAAGTGTCCGACGAAAAAACACCGGATAATGCCAGCGAAACAGTAGAAGATG
CCATTCGGAACAAGGAAGGGGAGCGTCTTCTTAAATATATCCGGGAGGATGCGTTTGTGATCACTCTGGAGATTGGAGGC
GAACAGCTGACCTCTGAGAACTTCGCACGGAAGATCAACGAGCTGGGAATACGTGGGACCAGCCATATCCAGTTTGTGAT
CGGCGGCTCTATCGGTCTTGGAAAAGAAGTACTGAAGAGATCAGACTATGCTTTAAGCTTTTCGAAGATGACATTTCCTC
ATCAGCTGATGCGTGTGATCCTTCTGGAACAGATCTACCGTAGCTATCGTATCATCAGCGGAGAGCCCTATCATAAATAA

Protein sequence :
MKISILTVGKIKEKYLRDAIAEYSKRLGRYCKLEIIEVSDEKTPDNASETVEDAIRNKEGERLLKYIREDAFVITLEIGG
EQLTSENFARKINELGIRGTSHIQFVIGGSIGLGKEVLKRSDYALSFSKMTFPHQLMRVILLEQIYRSYRIISGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-47 62
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 1e-45 59
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 1e-45 59
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 1e-45 59
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 1e-45 59
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 5e-45 59
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 1e-45 59
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-45 59
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-45 59
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-45 59
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 1e-45 59
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-45 59
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 1e-45 59
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 1e-45 59
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 1e-45 59
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 6e-44 58
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 5e-43 58
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 3e-44 58