Gene Information

Name : CK1_39800 (CK1_39800)
Accession : YP_007785305.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Virulence
Product : Glycosyltransferases involved in cell wall biogenesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3516684 - 3517625 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTCTTTAATTATACCATGCTTCAATGAGGAAGAATCCCTTCCGCTTTTTTACCCGGAAGCCACTTCTGTCCTCAG
GCAAATGAACTGTGATTATGAGCTGATCTTTGTGAATGACGGTTCCAGAGACAGAACCCTTGAGATTTTAAAAGAGCTTT
CCGAAAAGGATCCTCATGTGATCTATCTTTCTTTTTCCAGAAACTTCGGAAAAGAAGCTGCCATGTATGCAGGCTTCTGC
AATGCCGGCGGCGATTATGTAGCAGTAATGGACGCTGATCTTCAGGATCCGCCGTCCCTTCTCCCGGAAATGCTGGAGAA
GCTGGAATCCGGAGAATATGACAGCGTTGCCACCAGACGTGTCAGCCGTGACGGAGAGCCACCTATCCGGAGCTTTTTTG
CCCGGAAATTTTATCAGCTGATCAATAAGATCTCGGATGCAGATATTGTGGACGGCGCCAGAGACTTCCGTCTGATGAAG
CGCAGTATGGTGGATGCCATCGTCTCCATGAGTGAGTACAACCGCTTCTCCAAGGGAATCTTCGGCTGGATCGGTTTCCG
CACCTGCTGGCTCCCCTACAAAAATATCGAACGCGTAGCCGGTGAGACCAAATGGAACTTCTGGAAGCTGTTTAAATACG
CCGTCAGCGGCATCATCAATTTTTCTCAGGTACCGCTGACCATCGCCTCCTGGTTCGGAACGACCATGACCGGTTTTTCC
TTTCTGGTCCTGGTAGCCATCATCGTCCGAAAGCTGATCTTCGATGATCCGGTCCCAGGCTGGGCTTCCACCATCTGTGT
CATCATCTTCATCGGCGGCCTGCAGCTTTTCTGCCTGGGTATCATGGGACAATACATAGCCAAAACCTATATGGAGGTCA
AGCAGCGCCCCCATTACATCATAGCAGAGTCCAACAAAAAGGACTTTACACCCATACGTTGA

Protein sequence : 
MISLIIPCFNEEESLPLFYPEATSVLRQMNCDYELIFVNDGSRDRTLEILKELSEKDPHVIYLSFSRNFGKEAAMYAGFC
NAGGDYVAVMDADLQDPPSLLPEMLEKLESGEYDSVATRRVSRDGEPPIRSFFARKFYQLINKISDADIVDGARDFRLMK
RSMVDAIVSMSEYNRFSKGIFGWIGFRTCWLPYKNIERVAGETKWNFWKLFKYAVSGIINFSQVPLTIASWFGTTMTGFS
FLVLVAIIVRKLIFDDPVPGWASTICVIIFIGGLQLFCLGIMGQYIAKTYMEVKQRPHYIIAESNKKDFTPIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-55 43
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 7e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_39800 YP_007785305.1 Glycosyltransferases involved in cell wall biogenesis VFG0670 Protein 6e-54 43