Gene Information

Name : CK1_03600 (CK1_03600)
Accession : YP_007782356.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 303456 - 304061 bp
Length : 606 bp
Strand : +
Note : -

DNA sequence : 
ATGATTATAATTCGTGGCTTAAATAAAGCATTTGGAGAGAAAATAATTTTCTCCAACTTTAATTTGGAAATTCCGGATGG
AAGTTTTGTAGTAATCAGCGGGGATAGCGGCAGTGGAAAAAGCACTTTGCTCAATATGATTGGTGGTATCGAAAAGCCGG
ATAGCGGCAGTATCATAATCGAAGGGCTGAATATTACCCGGCTTAAAATAAAACAGTTTTTTGCGGATACAGTGGGGTTT
CTTTTTCAGAATTTTGCACTGCTTGAAAATAAGACAGTTAAAGAAAATTTAAGTTTGATTAAAAAATCAAGCCGAACTAA
AGTATCACTTAAAGAAGCTCTTAATCGTGTGGGGTTATCAAAGGAAGTTAACAAAAAAGTTTATCAGCTTTCCGGTGGTG
AACAACAGAGAGTTGCTTTAGCTCGTCTTATGATGAAAAAATGTTCTGTTGTTTTGGCAGATGAACCTACTGGCTCACTT
GACAAGAAAAATAGAGATATTGTTATGAGGTTATTGCACGAACTCAATGAAGAAGGTAAAACGGTTATCATTGTTACCCA
CGATCAGGGTATTATTGAAGATGAACCTTATGTTGTGAAAATCTGA

Protein sequence : 
MIIIRGLNKAFGEKIIFSNFNLEIPDGSFVVISGDSGSGKSTLLNMIGGIEKPDSGSIIIEGLNITRLKIKQFFADTVGF
LFQNFALLENKTVKENLSLIKKSSRTKVSLKEALNRVGLSKEVNKKVYQLSGGEQQRVALARLMMKKCSVVLADEPTGSL
DKKNRDIVMRLLHELNEEGKTVIIVTHDQGIIEDEPYVVKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-37 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_03600 YP_007782356.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 7e-33 47
CK1_03600 YP_007782356.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-28 43
CK1_03600 YP_007782356.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-25 42