Gene Information

Name : CK1_33800 (CK1_33800)
Accession : YP_007784828.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2962201 - 2963085 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence :
ATGGATATAGAGATACGGGAATTTATTACATATTTACATAATAGAAAAAGGACGTCACATAATACAGAAGTATCTTACCA
GAGAGACCTGAAGAAGATGGCAGTGTATTTTGCAGATCGTGGGATCTATGATATCCGAGATGTAGGAGAACTGGAGCTGG
AAGGCTATCTCAGCTATATGGAGAGAGGACAGTTCGCTTCCTCAACGATCTCCAGAAATGTAGCATCTATCCGTGCCTTG
TTTCAGTATCTTTATCAGGAGAACAGGATCGAGAGGGATCCGTCTCTGGAACTGAAGCCGCCCAAGGTTGAGAAGCGGAT
GCCGGAGATCCTTACTGTGGATGAGGTAGACCGCCTTTTGAAACAGCCGGATCTGAATACACCGAAGGGAATCCGGGACA
GTGCCATGCTGGAGCTTTTGTATGCTACAGGAATGCGTGTCAGTGAACTTTTGCGGCTGAATCTGGAGGATCTCAATCTG
CGGCTTGGTTATGTAGTCTGTCACGATGAGGATAAGGAACGGGTGATCCCGATAGGAAATGTATGCAAAACAGCCATGGA
GAAATATCTGAAGGAAGCCCGTGGAAAATTTGTGAAAGAAAATGAGACGGAGAGTCTTTTTACCAACTGTTCAGGAAAAT
CCATGAGCAGACAGGGCTTCTGGAAGGTTCTGAAGGGATATGCAGAGGAAGCCGGGATCCAGCATGATATCACGCCGCAT
ACACTGAGACATTCTTTTGCCGCACATATGCTGCAGAATGGAGCGGACGTGAAGAGTGTGCAGGAAATGCTTGGACATTC
GGATATTTCCACCACACAGGTCTATCTGAACTTTGGCGTTGCGAAAATGCGAGACGTATATATGAAAGCACATCCGAGGC
ATTGA

Protein sequence :
MDIEIREFITYLHNRKRTSHNTEVSYQRDLKKMAVYFADRGIYDIRDVGELELEGYLSYMERGQFASSTISRNVASIRAL
FQYLYQENRIERDPSLELKPPKVEKRMPEILTVDEVDRLLKQPDLNTPKGIRDSAMLELLYATGMRVSELLRLNLEDLNL
RLGYVVCHDEDKERVIPIGNVCKTAMEKYLKEARGKFVKENETESLFTNCSGKSMSRQGFWKVLKGYAEEAGIQHDITPH
TLRHSFAAHMLQNGADVKSVQEMLGHSDISTTQVYLNFGVAKMRDVYMKAHPRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-37 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-37 43