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Name : CK1_03190 (CK1_03190) Accession : YP_007782322.1 Strain : Ruminococcus sp. SR1/5 Genome accession: NC_021014 Putative virulence/resistance : Unknown Product : Type IV secretory pathway, VirD4 components Function : - COG functional category : - COG ID : - EC number : - Position : 267544 - 269430 bp Length : 1887 bp Strand : + Note : - DNA sequence : ATGAAAAAGAAAAGCGGCAAAACTCTGATGCAGAAGTGGAAGAATAAAATCGGGGGTAAGCTGTCCGCCCTGGATAAAAA GAAACTGGTTCTTACAAATATCCCTTATGCTCTGGCTGCTTTCTATGCAGATCGGGCATTTTTTCTTTACCGGAACAGTC CGGGAGAAGATATGGGGAACAAACTTTTATATGCAATGGAACACGCAGACCGGATTTTAGCTGGTTTTGTGTTAAGCAAT AACTGGAAAGATCTGCTAGCAGGTATTGTTGTTGCAGTCGTTCTGAAAGTGTTGGTCTGGCAGAAACAGGCAGACGCAAA GAAATTACGGAAAGGCATCGAGTATGGTTCAGCCAGATGGGGAACCGCAGAGGATATCAAGCCTTATATGTCGGAAGATC CATGGATGAACATTCCATTGACAGCAACAGAAGCACTGACCATGGAGAGCAGACCGAAGCAGCCGAAGTATGCAAGAAAT AAAAATATAGTGGTTATCGGCGGCAGTGGTTCCGGTAAGACACGTTTTTTTGTAAAACCATCGGTCATGCAAATGAACTG TTCCATGGTCATTACAGATCCGAAAGGCACTTTGATTGAAGAGTGCGGGAAGATGTTAGCAAAGGGACCACCTAAGAAAG ATAAGAATGGAAATATCATGAAAGATAAATCTGGAAAAGTGGTACATGAGCCATATGTGATTAAGGTTCTGAATACCGTC AATTTTTCCAAGTCCCTTCATTACAATCCATTTGCTTATATACGGTCTGAAAAAGATATCCTGAAGCTGGTTACAACAAT CATTGTTAATACCAAAGGCGAAGGGGAAAAAGCTTCCGAAGATTTTTGGGTGAAAGCAGAGAGATTGCTGTACACCGCAC TGATTGCTTTTATCTGGTATGAAGGGGATGAAGAGGAAAAGAATTTGAATACTCTTCTGGATCTTTTGAATGAAAGCGAA ACCCGTGAAGAGGATGAAACTTACCAGAATCCAGTGGATATGATGTTCCAGGAACTGGAAGAAAGAGATCCGCAGCACTT TGCGGTCAGACAGTATAAAAAATACAAAATGGCGGCTGGAAAGACAGCGAAAAGTATTTTGATATCGTGTGGGGCCAGAC TTGCCCCATTTGACATCGCAGAGCTTCGAGAGATCATGTCTTATGATGAAATGGAATTGGATAAGATCGGGGATAGGAAA ACAGCCTTGTTTCTGATTATGTCCGATACAGATACAACCTTCAACTTTGTGATTGCGATGCTGCAGTCACAGCTTTTCAA TCTGCTTTGTGATAAGGCAGACGATGTATATGGTGGAAGACTTCCGGTGCATGTGCGTGTCATCGCTGATGAGTTTGCCA ACATCGGGCAAATTCCTCAGTTTGACAAGCTGATTGCAACTATCCGAAGCAGGGAAATCTCTGCTTCTATTATTTTGCAG TCACAGAGTCAGCTAAAGGCAATGTACAAGGATAGTGCAGATACCATTCTGGGTAACTGTGATACTACACTATTTCTTGG TGGAAAAGAGAAAACTACCTTAAAGGAAATGAGTGAACTTCTGGGTAAGGAAACCATTGATCTGTATAACACTTCGGAAA CGAGGAGCAATCAGAAGTCCTTTGGATTGAATTACCAGAAAACAGGCAAACAGCTGATGACAGAAGATGAGATTGCAGTC ATGGATGGAGGAAAATGTATCCTGCAGATTCGTGGTGCCAGACCATTTTTCTCAGACAAATATGATATCACGAAACACAA AAATTATCGGTTTCTTGCAGATGAAAATGAGAAAAACCGATACAAAGTAGAAAAAGAGTTAAATCCGCAGTACACACCGA AACCCGAAGAAGAGGTGGAGGTAATTCAGGTGGAGCTGTCGGAGTAA Protein sequence : MKKKSGKTLMQKWKNKIGGKLSALDKKKLVLTNIPYALAAFYADRAFFLYRNSPGEDMGNKLLYAMEHADRILAGFVLSN NWKDLLAGIVVAVVLKVLVWQKQADAKKLRKGIEYGSARWGTAEDIKPYMSEDPWMNIPLTATEALTMESRPKQPKYARN KNIVVIGGSGSGKTRFFVKPSVMQMNCSMVITDPKGTLIEECGKMLAKGPPKKDKNGNIMKDKSGKVVHEPYVIKVLNTV NFSKSLHYNPFAYIRSEKDILKLVTTIIVNTKGEGEKASEDFWVKAERLLYTALIAFIWYEGDEEEKNLNTLLDLLNESE TREEDETYQNPVDMMFQELEERDPQHFAVRQYKKYKMAAGKTAKSILISCGARLAPFDIAELREIMSYDEMELDKIGDRK TALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDVYGGRLPVHVRVIADEFANIGQIPQFDKLIATIRSREISASIILQ SQSQLKAMYKDSADTILGNCDTTLFLGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNYQKTGKQLMTEDEIAV MDGGKCILQIRGARPFFSDKYDITKHKNYRFLADENEKNRYKVEKELNPQYTPKPEEEVEVIQVELSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 9e-131 | 64 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 5e-148 | 58 |
