Gene Information

Name : CK1_03060 (CK1_03060)
Accession : YP_007782311.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Unknown
Product : DNA binding domain of tn916 integrase./Phage integrase family.
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 259533 - 260591 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGAAAAACGACGCGATAGTAAAAATCGCATTCTTCGCACAGGAGAGAGCCAGGAAGCGGATGGACGATACAAGTT
CCGATATATAGATGGCAATGGAAAGCGTAAGACGGTTTACAGCTGGAGATTGGTAGCTACGGATAGTATCCCAGCCGGAA
AAAGAGATAATGCACCTTTACGAGAACAGGAGAAAGCAATCAACAGAGACTTGAATGATATGATTACTCCTGATGGCGCA
GGCTTGACAGTTCTTGACTTGGTGAAGAAATACATTGCAACCAAGACAGGCGTTAAGCATACAACCAGAGCTGGTTATGG
TACTGTAATCAATTTGCTGGATAAGGATCCCTTTGGCGCAAGACGAATTGATAAAATTAGATTGTCGGATGCAAAGGAGT
GGTTGATTAGATTGCAGCAGGTGGATAAGAAAAGCTATTCAGCGATTCACTCCATCAGAGGGGTGGTTAGACCGGCATTT
CAGATGGCAGTGGATGATGATATATTAAGAAAGAACCCATTTGAATTTCAACTGGCAACTGTGGTGGTAAATGATGCGGT
CACTCGTGAGGCCATTACAAGAAAACAGGAAAGAACTTTCCTTGATTTCATCAAAAATGATACGCACTATAGCAAGTATT
ATGACGGTATGTACATTCTGTTTAAGACAGGGATGCGTATTTCGGAATTTACAGGGCTGACGGTTAAGGATTTGGATATG
GAGAGCAGAACCATCAATATTGATCACCAGCTGCAGAAGACCGGAACATTGGTCTATATTGATACAACAAAGACCTATGC
CGGTACAAGAGTGATTCCGATGCAGGATGATGTATACGAATGTTTTCAGCGTATATTGAAAAATCGCAGACCACCGAAGG
TAGAACCTATGATTGATGGTTATTCTGGTTTCCTATGCTTTGATAAGGACGGTAAACCTATGGTGGCAATGCATTGGGAG
AAATACTTCCAGCATGCGGTTGACAAATACAACAGCATTTATCGTGTACAGCTTCCTAAAATTACACCTCATGGTCGAGT
TATAATAAGGACAAGTTAG

Protein sequence : 
MSEKRRDSKNRILRTGESQEADGRYKFRYIDGNGKRKTVYSWRLVATDSIPAGKRDNAPLREQEKAINRDLNDMITPDGA
GLTVLDLVKKYIATKTGVKHTTRAGYGTVINLLDKDPFGARRIDKIRLSDAKEWLIRLQQVDKKSYSAIHSIRGVVRPAF
QMAVDDDILRKNPFEFQLATVVVNDAVTREAITRKQERTFLDFIKNDTHYSKYYDGMYILFKTGMRISEFTGLTVKDLDM
ESRTINIDHQLQKTGTLVYIDTTKTYAGTRVIPMQDDVYECFQRILKNRRPPKVEPMIDGYSGFLCFDKDGKPMVAMHWE
KYFQHAVDKYNSIYRVQLPKITPHGRVIIRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int YP_008394266.1 integrase Not tested Not named Protein 2e-71 47
SSU05_0917 YP_001198283.1 Tn916, transposase Not tested 89K Protein 2e-65 47
SSU98_0923 YP_001200481.1 Tn916, transposase Not tested 89K Protein 2e-65 47