Gene Information

Name : CK1_28450 (CK1_28450)
Accession : YP_007784392.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Unknown
Product : LPXTG-site transpeptidase (sortase) family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2492002 - 2492916 bp
Length : 915 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAAAAAGAAAAAAGAAAAGAGTAATGTTGTCCTGAACATCATTATTGTCCTGGTGTTTCTGGCGGGGGCGGGTGT
GTTCCTTTATCCCACGATCAGTGATATGTGGAACCAGTATCGAAATGCCCAGCTGGTCAGTAAGTACGAGGAAGCGGTAA
CGGAGCTTTCAGACAACGACTATGACAGGCTGTGGAAAGAGGCGAAGGAGTATAATGCCGAGCATCCGGTGAATGCCATT
GTAGATGCTTTTGAGGAAGAGGATACTTATGAGCTGAGTCATCCTTATGACAGGGTTCTGGATCCGAACGGTGATGGTCT
GATGGGGAGTATCGAGATCCCGAAGATCAAAGCCAGACTGGCGATCTATCACGGACTGAGCAAAACGGTCCTGGAAAAGG
GTGTCGGTCATGTGGAGGGTACCAGCCTTCCCATCGGAGGCAGGAGCACCCATGCGGTTCTGGCGGCGCATCGAGGTCTT
CCTAACGCAAAGCTTTTTACAGATCTGGATCAGATGGAAAAGGGAGATATTTTTATCCTGCACATTCTTGGCAAGCATCT
GGCCTATAAGGTGGATCAGATCAAGACGGTGCTTCCGGATGAGACCAGTGACCTGGATATTATTGAGGGTGAAGATCATG
TGACTCTGATCACGTGTACCCCTTATGGAGTTAACACCCACAGGCTTCTTGTCCGGGGAGTGCGGACGAAATATGTGGTG
GAAGATACAAAGAATGACGAAACGATACCGCAGAAGCTTGCTGTTGTGGATCCGAAGAGGGTTCTGGCCGGCGGCGCTGC
AGTGCTTGTTGTTCTGATCCTGCTGATTTATCTGATCGTCCGTCATAGGGACAAAAAACGGAAAAAGAAGCAGCTTTCAG
AAAGGAAAGAGGAGGCAGAGAGCGATGAAAAATAG

Protein sequence :
MAKKKKEKSNVVLNIIIVLVFLAGAGVFLYPTISDMWNQYRNAQLVSKYEEAVTELSDNDYDRLWKEAKEYNAEHPVNAI
VDAFEEEDTYELSHPYDRVLDPNGDGLMGSIEIPKIKARLAIYHGLSKTVLEKGVGHVEGTSLPIGGRSTHAVLAAHRGL
PNAKLFTDLDQMEKGDIFILHILGKHLAYKVDQIKTVLPDETSDLDIIEGEDHVTLITCTPYGVNTHRLLVRGVRTKYVV
EDTKNDETIPQKLAVVDPKRVLAGGAAVLVVLILLIYLIVRHRDKKRKKKQLSERKEEAESDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-40 44
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-40 41