Gene Information

Name : CK1_22010 (CK1_22010)
Accession : YP_007783859.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1901326 - 1902024 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTCTGGAGATAAAAGGAATCAAAAAATCCTTCGGGGCAGGAGAGAGCCATGTAGATGTTCTGAAGGGGATCGATCT
TGAGATTGAAAAGGGAGAATTTTGTGTGCTTCTGGGGCCGTCCGGTTCCGGGAAATCCACGCTGCTAAACATTATTGGCG
GCATTGACGGAGCAGATGCAGGAAGCATTACCATTCAGGGAGAACAGCTGGAGGATATGAATGAAAAGAAGCTTTCCCTC
TACCGCAGAAAACATCTGGGATATATTTTTCAGATGTATAATCTGATTCCCAATCTGACTGTGAGGGAGAATATTGAAGT
TGGTGCTTATTTAAGTGACAGACCGCTGGATGTGGATGAACTGCTGGAGACACTGGGACTTTATGAACATCAGCGGAAGC
TTCCGAACCAGCTTTCGGGAGGTCAGCAGCAGAGAACTGCTATTGGACGTGCCATTGTAAAAAATCCGGATATCCTGCTT
TGTGATGAGCCTACCGGCGCTCTGGACTACAACACCTCCAAGGAAATCCTGAAGCTGATCGAAACAGTCAATCACAAATA
CGGAAATACTATAGTCATGGTTACTCATAACGATGCCATCAAGGATATGGCAGACCGTGTGGTAAAGCTTCGTGACGGGA
TGATCCGCAGAAACTATCAGAATGAGCAGAAGATTCCGGCTGCTGACCTGGAATGGTAA

Protein sequence : 
MFLEIKGIKKSFGAGESHVDVLKGIDLEIEKGEFCVLLGPSGSGKSTLLNIIGGIDGADAGSITIQGEQLEDMNEKKLSL
YRRKHLGYIFQMYNLIPNLTVRENIEVGAYLSDRPLDVDELLETLGLYEHQRKLPNQLSGGQQQRTAIGRAIVKNPDILL
CDEPTGALDYNTSKEILKLIETVNHKYGNTIVMVTHNDAIKDMADRVVKLRDGMIRRNYQNEQKIPAADLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 48
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_22010 YP_007783859.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-42 46
CK1_22010 YP_007783859.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 8e-42 44
CK1_22010 YP_007783859.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 7e-39 42
CK1_22010 YP_007783859.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-34 42