Gene Information

Name : CK1_17480 (CK1_17480)
Accession : YP_007783482.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1468827 - 1469552 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAAAGTTAAACTGAGCAACTGGAAGTCTGATCACCAGATGGATGAGGCTTATAAAGCTCTGCGAACAAATATCCA
GTTCTGCGGAGCAGATAAGAAAGTGATCGCACTTACCAGCTGTACTCCTAATGAGGGAAAGAGCAGTGTGGCATTTAATC
TTGCTGCCTCTCTTGCTGAGAGCGGCAAATCAGTGCTTCTGATCGATGCCGATCTGCGTAAATCCGTTTTGATGGGACGT
GTGACAGTAGACCAGGAGGTAATGGGACTTGCTCATTATCTTTCCAAGCAGGCCAAGCTTTCTGACGTGATCTGTGCCAC
TACACTTCCGAAGTTCCATATTATCTTCTCCGGTATCGTACCTCCGAACCCGGCAGAGCTTCTCGGAAACAGACTCTTCA
AGGATATGATCCGCGTGGTAAGAGATGTTTATGATTACGTTATTGTAGATACACCGCCGCTTGGACTGATCATCGACAGT
GCTATCATAGCAGATTCCTGCGACGGATCTGTAATCGTCGTTGAATCCGGTACCATCAGCTACCGTTTTGTACAGGAAGT
AAGAGATCAGCTTGCCAAGAGCAACTGCCCGATCCTGGGAACCATCCTGAACAAGGTGGACTACAGCAAGGCCGGCAATT
ACGGTCACTATGGCAAGTATGGTAAATACGGCAAGTACGGTAAGTATGGTTCCTACGGAGATTATGGTGAGAGCAGCAGT
AAATAA

Protein sequence : 
MIKVKLSNWKSDHQMDEAYKALRTNIQFCGADKKVIALTSCTPNEGKSSVAFNLAASLAESGKSVLLIDADLRKSVLMGR
VTVDQEVMGLAHYLSKQAKLSDVICATTLPKFHIIFSGIVPPNPAELLGNRLFKDMIRVVRDVYDYVIVDTPPLGLIIDS
AIIADSCDGSVIVVESGTISYRFVQEVRDQLAKSNCPILGTILNKVDYSKAGNYGHYGKYGKYGKYGKYGSYGDYGESSS
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 7e-28 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_17480 YP_007783482.1 capsular exopolysaccharide family VFG1349 Protein 4e-33 45
CK1_17480 YP_007783482.1 capsular exopolysaccharide family VFG1368 Protein 3e-24 43