Gene Information

Name : RBR_09860 (RBR_09860)
Accession : YP_007781078.1
Strain : Ruminococcus bromii L2-63
Genome accession: NC_021013
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1042447 - 1044912 bp
Length : 2466 bp
Strand : +
Note : -

DNA sequence :
ATGTATCAGTTCAAAGGTTTTACAGAAAAAGCAAACAAGGCGCTTAATCTTGCGATTGAAAGTGCAGAGGAAATGCGCCA
CAACTATGTCGGTACAGAACATATTCTCTACGGACTCGTAAAAGAGGGCAGCGGTGTTGCCGCAACAGCTCTTAATGAGT
GCGGAGTAACGGAAGATGCTCTCCGTGAAAAGCTTGAATCCATTAACGGTACAATGTCGCTCGTTGAGCTTACTCCCGAT
GATTTTACTCCCCGTACAAAGAGAGTTTTGAGAGCCGCAGTTATCATTTCTTCAAAAACAGGCTACACCTATGTAGGCAC
AGAGCATTTGCTCCTTGCAATCCTTTCGGAGAGCGACAGCTACGCAGTTGCTTTTCTTGAGGAACTCGGTGTATCTGTTG
AAAGACTTGCACAGGCTGTGTCAAAAGGTATGCAGGGCGGTGCAGAGGAAGGCTTCGGCGGTTTTGAAAACGAATCCGCT
CCGAACGGTTCACAGAAAGGCGGTTCGGCTCTTGATAAATTCGGCAGAGATCTTACTCAAGCCGCAAAGAACGGTGAAAT
TGATCCTGTAATCGGCAGAGAAAAGGAAATCCAGAGGGTTATCCAGATTCTTTCCCGCCGTACAAAGAACAATCCTGTTC
TTATCGGTGAACCCGGTGTAGGTAAAACTGCGGTTGCAGAGGGACTTGCACTTGAAATTGCAAAGGGCAATGTGCCTGAA
ATCCTTAAAGACAAGCGAGTTGTCAGCCTTGACCTCACAGGTATGGTAGCAGGTGCGAAGTACAGAGGTGACTTTGAGGA
GAGAATTAAGGCGGCTATTGACGAGGTTAAAAAGTCAAAGAACACTATCCTCTTCATTGATGAACTTCATACTATCGTTG
GTGCGGGTGCCGCAGAGGGCAGTGCAGACGCCGCAAATATCCTTAAACCGTCACTTGCAAGAGGCGATTTTCAGGTTATC
GGTGCAACAACTCTTAACGAGTACAGAAAATATATTGAAAAAGATGCCGCTTTGGAGCGTCGTTTCCAGCCCGTAAAGGT
TGGCGAGCCTACTCCCGAACAGGCTGTACAGATTCTCAAAGGCTTGCGTGACAGCTATGAGGCACACCATAAGGTTAAGA
TTACCGATGAGGCAATCAATGCTGCAGTAACATTGTCATCAAGATATATCGCAGACCGTTACCTCCCCGATAAGGCAATT
GACCTTATTGATGAGGGTGCGTCAAAGGTAAGGCTTGCATCTCTTACTTCTCCTGATAATGTAAAGGAGCTTGAAGATGA
AATTGCAGACTATGAAAAGGAAAAGGCAAGTGCAATTAACGAGCAGGACTTTGAAAGGGCTGCACGACTTCGTGATGAGC
AGAAGGAACTTCAGACAAAGCTTGACGATGCAAAGAAGAAGTGGCAGGAACAGCAGAAGGGTAACAGCGGCGAGGTAACT
GCCGAGGATATCGCAAAGATTGTTTCTGAATGGACAGGTATCCCTGTTGTTCAGCTTACTAAGGAAGAAAGCGAAAGACT
TCTTAACATGGAGAATGTTCTCCACGAAAGAGTTATCGGTCAGAGCGAGGCTGTAACTGCAATCGCAAAGGCTATCAGAC
GAGGCAGAGTAGGTCTTAAAGACCCGAAAAGACCTGTCGGTTCGTTTATCTTCCTCGGTCCGACGGGTGTCGGTAAAACA
GAACTTTGCAAGGCTCTTGCAGAGGCAATGTTCGGCGATGAAAACGCAATGCTCCGTCTTGATATGAGTGAATATATGGA
GAAACACACCGTGTCAAAGCTTATCGGTTCACCGCCCGGATATGTAGGCTTTGAGGAGGGCGGTCAGCTCACCGAAAAGG
TAAGAAGAAAACCGTATTCGGTTGTACTTTTTGATGAGATTGAAAAGGCTCACCCCGATGTATTCAATATGCTCCTCCAG
ATCCTTGAGGACGGCAGACTTACCGACTCACAGGGCAGAACGGTTGACTTTAAGAACACCATTATCATAATGACCTCTAA
TGTCGGCGCAAGACTTATCACCGAAAAGCAGAGCTCACTCGGTTTTAATTCCGAAAATGAGAATGCCGAAGAGAGCGAGA
AAAAGGACATCAAGGAGCTTGTAACAGGCGAACTCCGCAAGGTATTCCGTCCTGAATTCTTGAACCGTGTTGACGATATT
ATCGTGTTCAACAAGCTCAACAAGGACGAAATTAAGCAGATTGCCGTTAAGATGCTCAAAACTCTTGAAAACCGTCTTGA
TAAGATGAATATTAAAATCAGCTTTACAGACAACGCAGTCAGCAAGATTGCCGACAAGGGCTTTGACGAAAACTACGGTG
CAAGACCTCTCCGCCGTGCAATACAGAATGAGATTGAAGATCCGCTTTCAGAGCAGATGCTCGAGGGCAAGGTCAAGGAC
GGCGCAGTAGTTACCTGCGATTTCGCAGACGGTCAGTTTACCTTTACAACAGCAAACGCCAATTAA

Protein sequence :
MYQFKGFTEKANKALNLAIESAEEMRHNYVGTEHILYGLVKEGSGVAATALNECGVTEDALREKLESINGTMSLVELTPD
DFTPRTKRVLRAAVIISSKTGYTYVGTEHLLLAILSESDSYAVAFLEELGVSVERLAQAVSKGMQGGAEEGFGGFENESA
PNGSQKGGSALDKFGRDLTQAAKNGEIDPVIGREKEIQRVIQILSRRTKNNPVLIGEPGVGKTAVAEGLALEIAKGNVPE
ILKDKRVVSLDLTGMVAGAKYRGDFEERIKAAIDEVKKSKNTILFIDELHTIVGAGAAEGSADAANILKPSLARGDFQVI
GATTLNEYRKYIEKDAALERRFQPVKVGEPTPEQAVQILKGLRDSYEAHHKVKITDEAINAAVTLSSRYIADRYLPDKAI
DLIDEGASKVRLASLTSPDNVKELEDEIADYEKEKASAINEQDFERAARLRDEQKELQTKLDDAKKKWQEQQKGNSGEVT
AEDIAKIVSEWTGIPVVQLTKEESERLLNMENVLHERVIGQSEAVTAIAKAIRRGRVGLKDPKRPVGSFIFLGPTGVGKT
ELCKALAEAMFGDENAMLRLDMSEYMEKHTVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNMLLQ
ILEDGRLTDSQGRTVDFKNTIIIMTSNVGARLITEKQSSLGFNSENENAEESEKKDIKELVTGELRKVFRPEFLNRVDDI
IVFNKLNKDEIKQIAVKMLKTLENRLDKMNIKISFTDNAVSKIADKGFDENYGARPLRRAIQNEIEDPLSEQMLEGKVKD
GAVVTCDFADGQFTFTTANAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 53
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RBR_09860 YP_007781078.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 57
RBR_09860 YP_007781078.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 7e-157 56