Gene Information

Name : RBR_01000 (RBR_01000)
Accession : YP_007780333.1
Strain : Ruminococcus bromii L2-63
Genome accession: NC_021013
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III, bacteria and conjugative plasmid
Function : -
COG functional category : -
COG ID : -
EC number : 5.99.1.2
Position : 89484 - 91559 bp
Length : 2076 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTTGTAATTGCAGAAAAACCGAGCGTCGGGGCGGCGATTGCCGCCGTTATGGGCGCGAATGAAAAGCGCAGCGG
ATATTTTGAGGGCGGCGGCTACCTTGTGTCGTGGTGTATCGGGCATTTGATTAGCCTTGCAGACGCGGCGACCTACAATG
AACAATTCCGTAAATGGAAGTACGACGATCTTCCCATTGTCCCGCAGGAGTGGCAGTTTATTGTTGCCAGCGGCAAGGAG
CAGCAGTTTTCCATTCTCAAAGACCTTATGCACCGCAGCGACGTTACCGAGATTATCAATGCTTGCGACAGCGGGCGCGA
GGGGGAACTCATTTTCCGCTTTGTCTATGAACAGGCGAATTGCAAAAAGCCCTTTTCCCGCCTTTGGATTAGCAGCATGG
AAGCAAGTGCAATCCGCGAGGGCTTTTCAAATCTCAAAGACGGGCGCGGCTATGACAACCTCTATCAATCCGCGCTTTGC
AGAGCAAAGGCCGATTGGCTCATTGGCATTAACGCGACCCGCCTTTTCTCTATCCTCTACCATAAAACATTGAATGTCGG
CAGAGTGCAAACGCCCACCCTTGCTATGCTGGTAAACCGCGACTATGCAATCAGCAGCTTTAAGAAAGAGAAATATCATG
TCGTCCGGCTGGACGTTGGCGGCGTTGCCGCCCTTTCCGAAAGGCAGGACGACGAAGCGGCGGCGCGGCAGATGAAAGCG
GCTTGCGAGAAATCGCAGGCCGTTTGTACTTCCCTTAAAAAAGAGAAAAAGACCGCAGCCCCGCCGAAACTGTTTGACCT
CACCGCCTTGCAGCGGGAAGCAAACCGTTTGTATGGGTTTACGGCGAAACAGACCCTTGACTATGCGCAAGCCCTTTATG
AAAAACGGCTTTTGACCTATCCCCGCACCGACAGCAAATATATCACTTCCGATATGGAGGGCAGCACAAAGGAACTTATC
ACCGGCCTTTGCGCTGCTCTCCCCTTTATGCAGGGCGTGAAGCTGCAAGCCGACCTTGCGAGGATTTGCGACAACAGCAA
AGTAACCGACCATCACGCCATTTTGCCGACAGCGGAGTTTGTGAAAACGGGCTTTTCTTCCCTTGCCGAAAGTGAGAAAA
AGCTAATGACCCTTGTGTGCGCAAAACTGCTTTGCGCCGTTGCCGCGCCCTATGAGTATGAAGCGGTTACGGCGGTTTTC
ACTTGCGGCGGCTATACCTTTACCGCAAAGGGCAGGACGACGCTTTGCGAGGGTTGGCGCGAGATTGAAAGACTATCCCG
CGCCGCGTCCGGGGAACAGGACGAGGACGCAGAGCCGGAAGCGGTTTTACCCCCGCTTGCCGAGGGGCAGACCTTTGACA
ATCCGGCAGCGGAGATCTCCGAACGTTACACGCAGCCCCCAAAGGCATTTACCGAAGATACGTTACTTTCGGCTATGGAG
AGTGCGGGAAAGGAGGACACGCCGGAGGACGCGGAGCGCAAAGGGTTAGGCACCACCGCGACGCGGGCGGGTATCATTGA
AAAACTCATTAGCGCGGGCTTTGCCGAGCGCAAGGGCAAAAAGCTAATCCCCACAAAGGACGGGTATAACCTTGTCGCTA
TTCTGCCCGACAGCCTTACGTCCCCGCAGCTTACGGCAGAATGGGAAACGCGCCTTACCGGGATTGCAAAGGGCAGCGAC
AGCCCCGCCGACTTCATGCGCGGGATTGAGGAAATGACAGCGGGGCTTGTCAAGACCTATTCCGCGATTTCCGAGGATAA
AGCGAAGCTGTTTACCCCGCAGCGGGAAGCAATCGGCACTTGCCCCCGTTGCGGCGCGGCGGTTTACGAGGGCAAGAAAA
ACTTTTACTGCTCCGACAGGGCTTGCAGCTTTGTGATGTGGAAGAATGACCGCTTTTTTGAGCAGCGCAAAAAGGCTTTC
ACAAAGGCGATTGCCGCCGCCCTTTTGAAAGACGGAAAGGTAAAAATCAAAGGTATGTACTCGACCAAGACGGGAAAGAC
CTTTGACGGAGTTGTGCTGCTTGCCGACACAGGCGGCAAGTATGTAAACTTCCGCGTCGAGCAGAACCGAAAATGA

Protein sequence :
MKLVIAEKPSVGAAIAAVMGANEKRSGYFEGGGYLVSWCIGHLISLADAATYNEQFRKWKYDDLPIVPQEWQFIVASGKE
QQFSILKDLMHRSDVTEIINACDSGREGELIFRFVYEQANCKKPFSRLWISSMEASAIREGFSNLKDGRGYDNLYQSALC
RAKADWLIGINATRLFSILYHKTLNVGRVQTPTLAMLVNRDYAISSFKKEKYHVVRLDVGGVAALSERQDDEAAARQMKA
ACEKSQAVCTSLKKEKKTAAPPKLFDLTALQREANRLYGFTAKQTLDYAQALYEKRLLTYPRTDSKYITSDMEGSTKELI
TGLCAALPFMQGVKLQADLARICDNSKVTDHHAILPTAEFVKTGFSSLAESEKKLMTLVCAKLLCAVAAPYEYEAVTAVF
TCGGYTFTAKGRTTLCEGWREIERLSRAASGEQDEDAEPEAVLPPLAEGQTFDNPAAEISERYTQPPKAFTEDTLLSAME
SAGKEDTPEDAERKGLGTTATRAGIIEKLISAGFAERKGKKLIPTKDGYNLVAILPDSLTSPQLTAEWETRLTGIAKGSD
SPADFMRGIEEMTAGLVKTYSAISEDKAKLFTPQREAIGTCPRCGAAVYEGKKNFYCSDRACSFVMWKNDRFFEQRKKAF
TKAIAAALLKDGKVKIKGMYSTKTGKTFDGVVLLADTGGKYVNFRVEQNRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00720 YP_008394244.1 DNA topoisomerase III Not tested Not named Protein 0.0 68
topB-2 NP_815968.1 DNA topoisomerase III Not tested Not named Protein 0.0 53