Gene Information

Name : RBR_07120 (RBR_07120)
Accession : YP_007780845.1
Strain : Ruminococcus bromii L2-63
Genome accession: NC_021013
Putative virulence/resistance : Unknown
Product : LPXTG-site transpeptidase (sortase) family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 767881 - 768765 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence :
ATGAGCTATCCGCTTGTCAGTTCCGCAATTAATAACTATGTCAGTAGAAGCAGGGTTAAGGAGTACACCGACAGGGTTGC
TCAGATGCCGAGTGAGAAAACTCAAAAAATGTTTGAAGAGGCTGCTAAGTACAATAACAGCCTTTCAAATAATATGATAA
TTACCGACCCGTTCGACGAAAAGGCTTTTCAGAAAATCGGTGCAAATTATGAGAAAACTCTCAATATTGATGATAACGGT
CTTATCGGCTATATTGATGTGCCGAAAATCAATGTTTATCTGCCGATTTATCATGGCACAAGCGAAGAGATTCTTTCTAA
AGGTGCAGGGCATCTTCAAAACACTTCCCTGCCTGTCGGCGGTGCAAGCACACATTCCGTAATTTCTGCCCATTCGGGTT
TTCCGGGAGAAACTTTCTTTGATTATCTCACTGATATGAAAGTAGGCGATGAATTTTATGTTCATATTCTCGACAGAACG
CTGAAATATGAGGTTGATCAAATCGAAGTTGTTCTCCCCTCGGAAATCAATTCCTTGCGAATTGTTGACGGTGAAGACCT
TGTAACGCTCCTCACCTGTACCCCATACGGCATTAATACTCACAGACTTCTCGTGCGTGGCAAGCGTGTCGATTATGACG
ATACAAAGTATATTGAAACGGGCGAGTCACTTGCAAAGTTTGACAACGGTTACATATTTTTCCTCGGTTACAAAATCCCT
TATGCAGTCGCAATCGGCATAATTGTCGGCTTTGTTGCTCTTGTTGTGTTTGTGGTTGTATTTCTGCTCAAACGCAAAAA
GAAGAAGTCAAACGGTGCAAAACGGCTGAGAGATGACTCGGCTGACGAAAATCAGAATGATTCGGGCGGTGATTCCGATG
ATTAA

Protein sequence :
MSYPLVSSAINNYVSRSRVKEYTDRVAQMPSEKTQKMFEEAAKYNNSLSNNMIITDPFDEKAFQKIGANYEKTLNIDDNG
LIGYIDVPKINVYLPIYHGTSEEILSKGAGHLQNTSLPVGGASTHSVISAHSGFPGETFFDYLTDMKVGDEFYVHILDRT
LKYEVDQIEVVLPSEINSLRIVDGEDLVTLLTCTPYGINTHRLLVRGKRVDYDDTKYIETGESLAKFDNGYIFFLGYKIP
YAVAIGIIVGFVALVVFVVVFLLKRKKKKSNGAKRLRDDSADENQNDSGGDSDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-36 43
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-33 41