|
Name : RBR_00760 (RBR_00760) Accession : YP_007780314.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Unknown Product : Type IV secretory pathway, VirD4 components Function : - COG functional category : - COG ID : - EC number : - Position : 68098 - 69879 bp Length : 1782 bp Strand : + Note : - DNA sequence : ATGAAGCAGATCAACTACAAAAAGCTGATACTTCCGAATATCCCCTATGTGTTCTTTGTCTATCTCTTTGATAAAGTCGG ACAGGCGGTGCGGCTTGCCCCCGGCGCGGATATTTCTGCAAAGATACTGAATATCACACAAGGATTTTCCGCAGCCTTTG AAAACGCCTTGCCGAGCGTTTACCCGTTGGATTTGCTTGTCGGCATTGTCGGTGCGGTGATTATCCGCTTGATAGTCTAT GTCAAAGGGAAAAACGCGAAGAAATACCGCAAGGGCGCGGAGTACGGCTCTGCCCGATGGGGAAACGCCGAAGATATAAA GCCCTACATAGACCCGGATTTCCAAAACAACATCATTTTGACGCAGACGGAACGGCTTACCATGAACAGCCGCCCGAAGC AGCCGAAGTACGCGAGAAATAAGAACGTCGTCGTGATCGGCGGCAGCGGCAGCGGAAAAACAAGATTTTTTGTCAAACCT AATCTAATGCAGCTTCATTCCTCTTACGTCTTAACCGACCCGAAAGGTACGGTTTTGATTGAGTGCGGGAAGCTGCTGCA ACGGGCGGGCTACCGCATTAAGGTACTGAATACGATTAACTTCAAAAAATCTATGCACTACAACCCCTTTGTGTATATCC GCAGCGAGAAAGATATTTTGAAGCTGGTAAATACGTTGATAGCGAATACCAAAGGTGAGGGAGAAAAAAGCGCGGAGGAT TTTTGGGTAAAGGCAGAACGGCTTTTGTATTGCGCGTTGGTGGGCTACATCTGGTACGAAGCCCCCGCCGAGGAAATGAA CTTTATTACCCTGTTGGAACTTATCAACGCCAGCGAAGCCCGCGAGGACGACGAGGAATATCAAAGCCCCGTCGATTTGC TGTTTGCCGACTTGGAAGAACGCGACCCCGACCATTTCGCGGTGAAGCAGTACCGAAAATATAAATTGGCGGCGGGCAAA ACCGCAAAATCAATCCTCATTTCTTGCGGTGCGAGGCTCGCTCCTTTTGATATAAAGGAATTGCGCGATCTTATGTCCTA CGACGAATTAGAACTTGACACGTTAGGCGACAGAAAAACAGCTTTGTTTTTGATTATGAGCGATACGGACAGCACGTTTA ATTTTGTTATCGCTATGCTGCAATCGCAGTTATTTAATCTCTTGTGCGACAAGGCCGACGACGAATACGGCGGCAAGCTG CCGGTTCATGTTCGCTGCCTGTTAGACGAGTTTGCAAACATTGGACAAATCCCGCAGTTTGAAAAATTGATTGCCACAAT CCGCAGCCGGGAAATCTCGGCTTCTATCATTCTGCAATCGCAGAGCCAGCTAAAAGCCATTTACAAGGACGCGGCAGAAA TCATACTTGACAATGCCGACAGCACCTTGTTTTTGGGAGGGCGCGGGAAAAATGCAAAGGATATTTCGGAGAACTTGGGA CGTGAAACAATCGACAGTTTCAACACTTCCGAAAATCGCGGCACGCAGGTTTCTCATGGCCTCAATTATCAGAAATTGGG AAAGGAGTTGATGACACAGGACGAAATCGCAGTTATGGACGGAGGAAAATGTATTTTGCAGTTGCGCGGCGTGCGCCCCT TTTTCAGCGATAAGTACGATATAACGCAGCACCCGAACTACAAATACCTTTCCGACTTCGACAAGAAAAACGCTTTTGAC GTTGAACGGTATATGTCCACCCGTCCGGCAATCGTAAAGCCCGACGAACCCTTTGACATATACGAAATAGATTTGTCCGA CGAGGACGCAGCCGCCGAATAA Protein sequence : MKQINYKKLILPNIPYVFFVYLFDKVGQAVRLAPGADISAKILNITQGFSAAFENALPSVYPLDLLVGIVGAVIIRLIVY VKGKNAKKYRKGAEYGSARWGNAEDIKPYIDPDFQNNIILTQTERLTMNSRPKQPKYARNKNVVVIGGSGSGKTRFFVKP NLMQLHSSYVLTDPKGTVLIECGKLLQRAGYRIKVLNTINFKKSMHYNPFVYIRSEKDILKLVNTLIANTKGEGEKSAED FWVKAERLLYCALVGYIWYEAPAEEMNFITLLELINASEAREDDEEYQSPVDLLFADLEERDPDHFAVKQYRKYKLAAGK TAKSILISCGARLAPFDIKELRDLMSYDELELDTLGDRKTALFLIMSDTDSTFNFVIAMLQSQLFNLLCDKADDEYGGKL PVHVRCLLDEFANIGQIPQFEKLIATIRSREISASIILQSQSQLKAIYKDAAEIILDNADSTLFLGGRGKNAKDISENLG RETIDSFNTSENRGTQVSHGLNYQKLGKELMTQDEIAVMDGGKCILQLRGVRPFFSDKYDITQHPNYKYLSDFDKKNAFD VERYMSTRPAIVKPDEPFDIYEIDLSDEDAAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00690 | YP_008394214.1 | TraG/TraD family protein | Not tested | Not named | Protein | 4e-156 | 79 |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 5e-175 | 65 |
