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Name : RBR_04740 (RBR_04740) Accession : YP_007780647.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Virulence Product : Predicted nucleoside-diphosphate sugar epimerases Function : - COG functional category : - COG ID : - EC number : - Position : 492205 - 494082 bp Length : 1878 bp Strand : - Note : - DNA sequence : ATGAAGAAGATTAATTTGCGTAAGATGTTTCTGGCTCTCGCAGATGTGTTTATTATCGTTGTCAGCGGTATTCTTGCAAA TTATATTCTCTTGCTTGTTGGCTACATAGGTGCTGCTTCAAGCAAAGGCTTGTTGAGCTATATTGTTATTGATCTTGTCA TGTGTCTGTTTACGCTTTATATAAGCGGAACATATTCAAAATTGTGGCGATACTTTAACGCAAAGGACTATATTGTGTGC GGAACTGCCGTCTTTTCTGGGTTTACGCTCGGCTTTGTAATCTCGTTGTTTTTGCAGATTCCGCAGAGAAAGATTTTTTG TATAGTACATTTCGCAATAGCCCTTGTCGGAATTCTTGCATTCCGTTTTGTTTTCAGAAGGACTTTTCTTGACCTTACCG AGGCAGGAAGGGCAGAGGGCGGAGAGCGCACCCTTATTGTGGGCGCAGGCAATGCCGGCAGAATGATTGTTCGTGAAATT CACAATGCGAAAGAGCAGGGTGATGTTAATAACCCTTCAAAAAGCATCATTCCGGTATGCTTTGTCGATGATGATTTGAA AAAGCTGAATCAGAAAATCGAAGGAATCCCCATTGTCGGAACCTGTCCCGAAATTGTTAAAATATGTGATGAATACCGCA TAGACAATATTATTGTTGCAGTTCCGTCATGTGAGGAAGATGAGAAGAGGAAGATTCTTGACTACTGTTCCGCAACAGAG TGCAAAATCAAGATTATTCCTTATCTCGGTGAGCTTTTGTTTGATGACGGGCATACACAGCTTATTTCACAGGCAAAGGA AATCAAGATTGAGGATCTTCTCGGAAGAAAACCCATTGAGTTTGACCGAAAGGAGATTCATGACCTTATCAACGGAAAGA TTTGTCTTGTTACAGGCGGCGGCGGTTCAATCGGCAGTGAGCTTGTAAGACAGATTGCAAAGAATGATCCGAAACAAATC ATCATTGTTGATATCTACGAAAACAACGCATATGACATTCAGCAGGAGCTTGTGCTTGAATACGGCACAAAGCTTAACCT TGTAACGCTTATTTCATCGGTTCGTGATTACGACAAAATGGAGCTTATCTTCAAGACATATCGCCCCGAACTCGTATTCC ACGCTGCCGCTCACAAGCATGTTCCGCTTATGGAAACCGTTCCCGAGGAGGCTGTAAAGAACAACATCTTCGGCACATTC AATGTTGCAACCCTTGCAGAAAAGTACAAGGCAAAGAAGTTTGTTATGATTTCAACCGACAAGGCTGTTAATCCGACAAA TGTTATGGGCGCAACAAAGCGTGCGTGCGAGATGATTATTCAGTACAAGGCACAGCACAGCACAGCTACCGAATTTGTAA CAACAAGATTCGGTAATGTTCTCGGCTCAAACGGCTCGGTTATTCCGCTGTTTCGCCGTCAGATTGAAAACGGTGCGCCC GTTACTGTAACACATCCAGATATTATCAGATATTTTATGACTATTCCCGAGGCTGTTTCGCTTGTTCTTGAGGCAGGTGC AATGGCAAAGGGCGGTGAGATTTTTGTTCTTGATATGGGTGCTCCCGTCAAGATTACAACCCTTGCCGAGAACCTTATCA GAATGTACGGTAAGGTTCCGTACAAAGATGTTCCGATTATCTTCACGGGACTTCGTCCGGGCGAAAAGCTTTTTGAGGAG CTTCTTATGGACGAAGAAGGTCTTAAGTCAACACAGAACAAGAAAATTTTCATAGGAAATCAAATTAAAATAGACGAAAC AGATATGCTGTCAAAGCTTGAGGTTCTCAAAAAGACCGCAGAAAACAATGACAGTGAAAAGACAGTTGAACTTTTGGCAG AACTTGTACCTACTTTTTGCCACAAGGTCAATGATTAA Protein sequence : MKKINLRKMFLALADVFIIVVSGILANYILLLVGYIGAASSKGLLSYIVIDLVMCLFTLYISGTYSKLWRYFNAKDYIVC GTAVFSGFTLGFVISLFLQIPQRKIFCIVHFAIALVGILAFRFVFRRTFLDLTEAGRAEGGERTLIVGAGNAGRMIVREI HNAKEQGDVNNPSKSIIPVCFVDDDLKKLNQKIEGIPIVGTCPEIVKICDEYRIDNIIVAVPSCEEDEKRKILDYCSATE CKIKIIPYLGELLFDDGHTQLISQAKEIKIEDLLGRKPIEFDRKEIHDLINGKICLVTGGGGSIGSELVRQIAKNDPKQI IIVDIYENNAYDIQQELVLEYGTKLNLVTLISSVRDYDKMELIFKTYRPELVFHAAAHKHVPLMETVPEEAVKNNIFGTF NVATLAEKYKAKKFVMISTDKAVNPTNVMGATKRACEMIIQYKAQHSTATEFVTTRFGNVLGSNGSVIPLFRRQIENGAP VTVTHPDIIRYFMTIPEAVSLVLEAGAMAKGGEIFVLDMGAPVKITTLAENLIRMYGKVPYKDVPIIFTGLRPGEKLFEE LLMDEEGLKSTQNKKIFIGNQIKIDETDMLSKLEVLKKTAENNDSEKTVELLAELVPTFCHKVND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-81 | 47 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-87 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RBR_04740 | YP_007780647.1 | Predicted nucleoside-diphosphate sugar epimerases | VFG1300 | Protein | 1e-83 | 43 |
