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Name : RBR_00530 (RBR_00530) Accession : YP_007780296.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Unknown Product : Type IV secretory pathway, VirD4 components Function : - COG functional category : - COG ID : - EC number : - Position : 48034 - 49824 bp Length : 1791 bp Strand : - Note : - DNA sequence : ATGAGGAACGATGACCAGAAAACGAGCCTAATCCTTTCTGTCTGCGGCATACTTCCTGTCGTATGGCTTGCCCTGCTGAC AGCACCCTATGTCAGCGGCGGTCTTGTAGAGATTATCCGAGGTCTGCCCGTGGCGATGGGCAATCCGTTCGAAATAATGG TGTGTGAGGACAGCGTAAAGACTGTCCTTATTTTTTTGCTTGCCTACGTTATGGGCATCGGCGTTTATTTCTCTACACGC AGGAACTACCGCAGGCGTGAGGAACACGGCTCTGCGAAATGGGGCAACGCAGGTGCTTTGAATAAGAAGTACCGAGATAA AGACCCGTCAGCTAATAAGCTCTTGACCCAGAATGTCCGTATTGGGTTGGACGGGAAAAAGCACCGCAGGAATCTGAATA TTTTAGTCTGCGGCGGCTCTGGTGCGGGTAAAACAAGGTTTTTCTGCAAGCCAAATGCTATGCAGTGCAACACATCTTTT GTAATACTCGACCCAAAGGGCGAAATCGTCCGTGACATCGGGGGTCTGTTGGAAAATAAAGGCTATGAGGTGCGTGTGCT TGACCTTATCAATATGCACCGCAGCCATTGTTACAATCCCTTTGTCTATCTGCGGAACGATAACGATGTTCAGAGGTTGG TAACAAACTTGTTTAAGGCGACCACGCCGAAAGGCTCACAGTCGCAAGACCCGTTCTGGGATACGGCGGCGAGTATGCTG CTTCTGGCTCTGGTGTTCTATCTGAAATATGAAGCACCGCCAGACGAGCAGAATTTCCCGATGGTTATGGAGCTGCTCCG TGCAGGCGAAGTCCGAGAGGACGATGACAGCTATGTAAGCCCTCTGGACGAGCTGTTTGACCGTCTGGAAATGGTAAACC CAGAGCATATCGCCCTAAAGTATTACAGGGATTACCACAGTGGTAGTGCAAAGACCTTAAAGAGTATCCAGATAACCCTT GCCGCAAGGCTTGAAAAATTCAATCTGGAGAGCCTTGCAGGGCTTACCGCCACCGATGAGCTTGACCTGCCAAGTCTGGG AGAAAAGAAGGTCGCTCTGTTCGCTCTGATACCAGACAACGACACGAGCTTTAACTTCCTTGTCAGTATCCTTTATACCC AGCTCTTTCAACAGCTTTTTTATCTGGCAGACCACAAGTACGGCGGAAGCCTGCCTGTGCATTGCCATTTCATAATGGAC GAATTTGCGAATGTTTCATTGCCTGATGACTTTGATAAAATCCTGTCCGTTATGCGTTCCAGAGGGGTATCGGTATCCAT TATCCTGCAAAATTTGGCGCAGCTCAAAGCCCTTTTTGAAAAGCAATGGGAAAGCATTGTTGGCAACTGCGATGAGTTTT TGTATCTGGGTGGCAACGAGCAAAGCACCCACAAATATGTGTCAGAGCTTTTGGGCAAGGAAACCATTGATACCAACACC TACGGGAAAAGCTCTGGGCGGAGTGGTAACTATTCAACAAATTATCAGATTTCGGGGCGTGAGCTGATGACCCCAGACGA AGTGCGTATGCTTGATAACCGTTACGCACTTCTTTTTGTGCGTGGAGAACGCCCCGTTATGGACTTTAAGTATGACATCT TGAAGCACCCGAATGTAAAATTGACGGTTGACGGAGGACAACCGCCGTATATCCACGGAGAGCCTATGCAGGCTGTCGCA ACCATTGTGTTTGACAGTGATATTCCAGATAACGCCGTGAGCGTAAAAACTGTCAGCACTTCCTATGAGCTTCTGTCCGA TGAGGACTTGGAAGAAATATTCAATTTATAA Protein sequence : MRNDDQKTSLILSVCGILPVVWLALLTAPYVSGGLVEIIRGLPVAMGNPFEIMVCEDSVKTVLIFLLAYVMGIGVYFSTR RNYRRREEHGSAKWGNAGALNKKYRDKDPSANKLLTQNVRIGLDGKKHRRNLNILVCGGSGAGKTRFFCKPNAMQCNTSF VILDPKGEIVRDIGGLLENKGYEVRVLDLINMHRSHCYNPFVYLRNDNDVQRLVTNLFKATTPKGSQSQDPFWDTAASML LLALVFYLKYEAPPDEQNFPMVMELLRAGEVREDDDSYVSPLDELFDRLEMVNPEHIALKYYRDYHSGSAKTLKSIQITL AARLEKFNLESLAGLTATDELDLPSLGEKKVALFALIPDNDTSFNFLVSILYTQLFQQLFYLADHKYGGSLPVHCHFIMD EFANVSLPDDFDKILSVMRSRGVSVSIILQNLAQLKALFEKQWESIVGNCDEFLYLGGNEQSTHKYVSELLGKETIDTNT YGKSSGRSGNYSTNYQISGRELMTPDEVRMLDNRYALLFVRGERPVMDFKYDILKHPNVKLTVDGGQPPYIHGEPMQAVA TIVFDSDIPDNAVSVKTVSTSYELLSDEDLEEIFNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 4e-77 | 41 |
