|
Name : RBR_02450 (RBR_02450) Accession : YP_007780455.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Unknown Product : Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 246701 - 247402 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGAATAAACCCCTTGTACTCGTCGTGGAGGACGACCGTCCCATCCGCAATCTGATCGTAACAACGCTAAAGGCTCACGA TTACCACTACCTGACCGCGGAGAACGGACACAGCGCTATTATAGAAGCGACCTCCCATAACCCGGATATCGTTCTGCTGG ATCTGGGGCTGCCGGATATCGACGGCACACAGGTGATCGAAAGTATCCGCTCATGGTCAAATATGCCCATTATTGTGATC AGTGCGCGCAGCGAGGATAAAGACAAAATCACGGCGCTGGATGCCGGGGCGGACGACTATCTGACAAAGCCCTTTTCCAT AGAGGAGCTTTTGGCACGCCTTCGGGTCACGCAAAGACGGTTGCTGCTGCTTCAGGCAAGCGGCGACGCCGACTCACCCG TTTTCCAAAACGGCAAGCTTAAAATCGATTATGCCGCCGGCTGCGCTTATCTAAATGGGGAAGAATTGCACCTGACCCCG ATTGAATACAAGCTTTTGTGTCTGCTCTCTCATAATGTCGGAAAGGTGCTGACGCACACCTATATCACGCAGCAGATTTG GGGCAGCAGCTGGGAAAACGATATTGCTTCTCTGCGGGTGTTTATGGCGACACTGCGCAAAAAGCTGGAGCCGCAAAGGG ACTGTCCGCAATACATTCAGACGCATATCGGCGTCGGTTACCGTATGCTGCGGGTAGACTGA Protein sequence : MNKPLVLVVEDDRPIRNLIVTTLKAHDYHYLTAENGHSAIIEATSHNPDIVLLDLGLPDIDGTQVIESIRSWSNMPIIVI SARSEDKDKITALDAGADDYLTKPFSIEELLARLRVTQRRLLLLQASGDADSPVFQNGKLKIDYAAGCAYLNGEELHLTP IEYKLLCLLSHNVGKVLTHTYITQQIWGSSWENDIASLRVFMATLRKKLEPQRDCPQYIQTHIGVGYRMLRVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-36 | 45 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-35 | 44 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 2e-35 | 44 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 1e-35 | 44 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 2e-35 | 44 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 2e-35 | 44 |
