|
Name : RBR_21180 (RBR_21180) Accession : YP_007782015.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Unknown Product : Topoisomerase IA Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 2182465 - 2184282 bp Length : 1818 bp Strand : + Note : - DNA sequence : ATGCACCGCGCCGACGTTTCCGAAGTGGTAAATGCGTGTGACGCGGGGCGCGAGGGTGAATTGATTTTCCGCTTTGTCTA CGAAGTGGCGGGCTGCAAGAAGCCCATGCGCCGCTTGTGGATTTCTTCAATGGAGGACGGGGCGATTAAGGCGGGCTTTG CTTCCCTCAAAGACGGGCGGGACTATGGCGCGCTCTTTGCGTCCGCCCTCTGCCGCGCAAAGGCTGACTGGCTTATCGGC ATTAACGCCACCCGGCTTTTCTCCTGCCTGTATGGAAAGACCTTGAACGTGGGGCGCGTCCAGACCCCGACCTTAAAAAT GCTCACCGACCGGGACGCGGCTATCTCCCATTTCCAGAAAGAAAAATATTATCATGTTCGCCTTGATTTATCCGGCGCGG ACGCGGCAAGCGAAAGGATTTCGGACAAGGCAGAAGCCGACGCGCTGAAAGGGGCTTGCGAAGCGGGAAAGGCGGTATGC GTTTCCCTTACCAGAGAGAAGAAAACCGCAGCCCCGCCAAAGCTCTTTGACCTTACCTCTTTGCAGCGGGAAACGAACCG CATTTTCGGTTACACCGCAAAGCAGACCCTTGACCTTGCACAATCCCTTTATGAAAAGCGGCTCCTTACTTATCCGAGGA CGGACAGCAGCTTTCTTACTGACGACATGGGCGGCACCGCAGCGGACATTATCGCGCTGCTCTGCGAAAAGCTCCCCTTT ATGGCGGGCGCGGACTTCACGCCGGAGATTGCAAAGGTATTAGACAGCAAGAAAGTATCAGACCACCACGCAATCATTCC CACTATGGAGCTTGCAAAGGCTGACCCGGACGCGCTGCCGGAAAGCGAGAAGAATATCCTTACCCTTGCGGGGGCGCGTC TGCTTTTTGCCACCGCCGAGCCGCATATTTATGAAGCGGTTACGGCGGTTTTCTCATGCGCCGGGACAGACTTCACCGCA AGGGGAAAGACCGTACTTGCGGAGGGTTGGAAAGAGCTTGAACGCAGATACCGGGCGACGCTGAAAGATAAGCCCGAAGC AGAGGACGGGGAAAATGAGGGCGTGACGCTGCCGGAGCTTTCCGAGGGACAGAACTTTCCTAACCCCGCCGCAAAAGTAA CGGAGCATACCACAACGCCGCCGAAGCCCCACAGCGAAGCGTCGCTTCTCTCTGCTATGGAGCGAGCCGGGAACGGGGAC ACCGACCCGGACGCGGAACGCCGGGGGCTTGGCACTCCCGCCACCCGCGCCGCCGTCATTGAAAAACTGGTAAAGGGCGG CTTTGCAGAGCGCAAGGGGAAGCAGCTTATCCCCACGCAGAACGGAGCCGCCCTTATATCAGTCTTGCCGGATATGCTCA CTTCCCCGCAGCTTACCGCAGAATGGGAAAACAATCTGACGCAGATAGCAAAGGGAGCCGCAGACCCCGGCGAATTTCTG TCCGGCATTGAAGCTATGGCGCGGGAGCTTGTGCAGACACACGCCGCAGCACTGGACGGGAAAAAGGATTTGTTCCGGGA GGAAAAGCCCTCTGTCGGCAAATGCCCCCGTTGCGGTTCCCCCGTCCATGAGGGGAAGAAAAACTATTATTGCAGCAACA AAGAATGTGCCTTTGTCATGTGGAAGAATGACCGCTTTTTCGAGGAACGCAAGACCGCTTTTTCCGCGAAGATTGCCGCC GCGCTCCTTAAATCCGGCAAAGTGAATGTGAAGAAGCTCTATTCCCCGAAAACAGGCAAGACCTATGACGGAACTATCGT TCTGGCTGACACTGGCGGGAAATACGTCAACTACCGTATCGAAGTACAGAAGAACTAA Protein sequence : MHRADVSEVVNACDAGREGELIFRFVYEVAGCKKPMRRLWISSMEDGAIKAGFASLKDGRDYGALFASALCRAKADWLIG INATRLFSCLYGKTLNVGRVQTPTLKMLTDRDAAISHFQKEKYYHVRLDLSGADAASERISDKAEADALKGACEAGKAVC VSLTREKKTAAPPKLFDLTSLQRETNRIFGYTAKQTLDLAQSLYEKRLLTYPRTDSSFLTDDMGGTAADIIALLCEKLPF MAGADFTPEIAKVLDSKKVSDHHAIIPTMELAKADPDALPESEKNILTLAGARLLFATAEPHIYEAVTAVFSCAGTDFTA RGKTVLAEGWKELERRYRATLKDKPEAEDGENEGVTLPELSEGQNFPNPAAKVTEHTTTPPKPHSEASLLSAMERAGNGD TDPDAERRGLGTPATRAAVIEKLVKGGFAERKGKQLIPTQNGAALISVLPDMLTSPQLTAEWENNLTQIAKGAADPGEFL SGIEAMARELVQTHAAALDGKKDLFREEKPSVGKCPRCGSPVHEGKKNYYCSNKECAFVMWKNDRFFEERKTAFSAKIAA ALLKSGKVNVKKLYSPKTGKTYDGTIVLADTGGKYVNYRIEVQKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00720 | YP_008394244.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 67 |
| topB-2 | NP_815968.1 | DNA topoisomerase III | Not tested | Not named | Protein | 6e-158 | 51 |
