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Name : RBR_17480 (RBR_17480) Accession : YP_007781707.1 Strain : Ruminococcus bromii L2-63 Genome accession: NC_021013 Putative virulence/resistance : Resistance Product : D-alanine--D-alanine ligase Function : - COG functional category : - COG ID : - EC number : 6.3.2.4 Position : 1829885 - 1830934 bp Length : 1050 bp Strand : + Note : - DNA sequence : ATGCAAAAGAAAAAAATAGCAGTTATTTTTGGAGGCAATTCAACAGAGTACGAGGTGTCATTACAATCGGCATTTTCCGT GTTTGAAAATATCAATCATGATAAGTATGACATTATCCCCATAGGAATCACTCGAAACGGGGACTGGTATCACTACAAAG GTCGGTATGAGAACATAGCAAATAATACTTGGAGCGGGGATCGGGACAATCTCTATCCTGTGACCGTATCTGTAAGTCAC TCTCAAAAGGGCATTTGGGAATTTGACGAGGATCAATACACTGCTGTTCATATAGATTTGGTTTTCCCAATTTTACACGG CAAAAACGGAGAGGATGGCACACTTCAAGGAATGTTTGAACTTTCGGGTATTCCTGTGATCGGCTGCAATACGCTTGCTT CGGCTCTCTGTATGGATAAGGACAGAGCGCACAAGCTCGTAAGCCTTGCCGGAGTAAAAGTTCCGAAATCGGTAACTTTC AAACGCTCTGAAAAGAATACGGCTTTGAAAAAAATCGAAACAGAGCTTTCCTATCCGCTTTTCGTAAAACCGGTTCGTGC AGGCTCGTCTTTTGGTATTACAAAAGTAACTGAGCAAGCAGAAATAAATACCGCCATAGAATCAGCCTTTGAACACGATA CAGAAGTCATCGTTGAAGAAGCAATAGGTGGATTTGAGGTAGGCTGCGCCATACTCGGTATCGACAACCTGACGGTTAGA CGAATAGATGAAATTGAACTGTCAAACGGTTTCTTTGACTATACAGAAAAATATACCTTAAAAACTTCAAAAATCCATAT GCCTGCAAGACTTTCTCCAAAAGAAGAAAAACGGGTACAGGAAACAGCGGTGGCGATATATAAGGCTTTGGGCTGTTCCG GCTTTGCGAGGGTAGATATGTTTTATACACCTTCCAATGAGATCATTTTTAATGAAGTGAATACCATACCGGGACTTACC TCCCACAGTCGCTATCCAAATATGATGAAAGGTATCGGTCTGTCCTTTGCGGATATGTTGGACAAGCTGATAAGTCTGTA TGTGGAATGA Protein sequence : MQKKKIAVIFGGNSTEYEVSLQSAFSVFENINHDKYDIIPIGITRNGDWYHYKGRYENIANNTWSGDRDNLYPVTVSVSH SQKGIWEFDEDQYTAVHIDLVFPILHGKNGEDGTLQGMFELSGIPVIGCNTLASALCMDKDRAHKLVSLAGVKVPKSVTF KRSEKNTALKKIETELSYPLFVKPVRAGSSFGITKVTEQAEINTAIESAFEHDTEVIVEEAIGGFEVGCAILGIDNLTVR RIDEIELSNGFFDYTEKYTLKTSKIHMPARLSPKEEKRVQETAVAIYKALGCSGFARVDMFYTPSNEIIFNEVNTIPGLT SHSRYPNMMKGIGLSFADMLDKLISLYVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 5e-63 | 44 |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 8e-63 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | U00456.gene.p01 | Protein | 2e-63 | 44 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | U35369.1.gene6.p01 | Protein | 2e-63 | 44 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AE016830.1.gene2250. | Protein | 2e-63 | 44 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AF310956.2.orf5.gene | Protein | 5e-64 | 44 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | L29638.gene.p01 | Protein | 3e-63 | 44 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AY145441.gene.p01 | Protein | 5e-64 | 43 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AF277571.gene.p01 | Protein | 7e-61 | 43 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AY489045.gene.p01 | Protein | 9e-61 | 43 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AF162694.gene.p01 | Protein | 2e-66 | 43 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | NC_005054.2598280.p0 | Protein | 1e-61 | 42 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | NC_014475.1.orf3.gen | Protein | 1e-61 | 42 |
| RBR_17480 | YP_007781707.1 | D-alanine--D-alanine ligase | AF130997.1.orf4.gene | Protein | 5e-57 | 41 |
