Gene Information

Name : RBR_12630 (RBR_12630)
Accession : YP_007781311.1
Strain : Ruminococcus bromii L2-63
Genome accession: NC_021013
Putative virulence/resistance : Unknown
Product : Transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1325456 - 1327603 bp
Length : 2148 bp
Strand : +
Note : -

DNA sequence :
ATGGATTATTCACAGATTCTTTCACAGCAGTTTAATATTAAAGAGGAGTATGCAAAGAACATCATCACATTGCTTGATGA
CGGCAACACTATTCCTTTTATTGCACGATACAGAAAGGAAATGCACGGTTCAATGGATGACCAGTTGATTCGTGAATTTG
CCGAAAAGCTTGAATATTTAAGAGGACTTGACAAGCGCAGAGATGAAATCCGTTCACTCATTGACGCACAGGAAAAGCTT
ACGGATGAAATCAACCTTGCACTTGACAAGGCTGCCACGCTAAGTGAACTTGAGGATATTTACCGCCCGTACCGTCCAAA
GAGAAAGACAAGGGCGTCAATTGCAAAGGAAAAGGGACTTGAACCGCTTGCTAATAATATTTTAAAGCCGGAAAAAGGTT
TTGATCCGTCAAAGTCGGCAGTTGATTATATTGATGAAGAAAAGGGAGTTACCTCCGTTGAAGATGCAATTCAGGGCGCA
ATGGATATCATTGCAGAGCTTGTGTCGGATAATGCGGAAATCCGTAAGAGAATAAGAAATCTTACAAACGCAAACGGTGT
GCTTGTGTCTGTTGCAACAGATGAAGAAAAGGACAGCGTTTACAAAAATTATTATGACTACAAAGAGCCTGTTAAAAAGA
TTGCAGGTCACAGAGTACTTGCCGTGAATCGTGGCGAAAAAGAGGGATTTCTCAAAGTCAGCGTTGAAACCGACAGCGAA
AAACCGCTTAATTCAATTTTCAGAGCAATGATTACAGACAAAAATCAGCTTTGTTCAGACATTATCCGTGAGGCTTGCAC
AGACGCTTATCAGCGACTTATTTATCCCTCAATTGAGCGTGAGGTCAGAAACGACCTTACAGATACCGCCTCCGAAAATG
CTGTGAAGGTTTTTGCCGTAAACCTCAAGCAGCTGCTTATGCAGCCGCCTGTAAAGGGCAAAACCGTGCTTGCACTTGAT
CCTGGATATCGCACAGGCTGTAAGACTGCCGTTGTTGACAGCACAGGCAAGGTGCTTGATACAACAGTAATTTATCCTAC
ACATTCAGACAAAAAAATTCAGGAATCAAAGCAGACCTTGCTCCGCCTCATCAAAAAGCATCATGTTGATATTATTTCAA
TCGGCAACGGTACTGCAAGCAAGGAAACCGAGATGTTCACAGCCGAAACAATCAAAGAGGCTGACCACCCCGTTTATTAT
ATGGTAGTCAGCGAGGCAGGTGCGTCGGTTTATTCGGCATCAAAGCTTGCCGCAACAGAACTTCCCGACCTTGATCTCAC
ACTCAGAAGTGCCGTGTCAATTGCAAGACGACTTCAGGATCCTCTTGCAGAGCTTGTTAAGATTGAGCCTAAGGCAATCG
GTGTCGGTCAGTATCAGCACGATATGCCGCAGAAAAAACTCGGTGAAACACTTGACGGTGTTGTAGAGGACTGCGTAAAC
TCGGTTGGTGCAGATCTTAATACGGCATCGCCTGCACTTTTGTCGAGAGTGTCTGGACTTAACGCAACCGTGTGCAAGAA
TATTGTTGCTTACCGTGAAGAAAACGGTGCGTTCTCATCAAGAGCAGAACTCAAGAAAGTTCCGAAACTCGGACCTAAAG
CGTTTGAGCAGTGTGCAGGATTTTTGCGTGTTCCCGAAAGCAGAAATCCACTTGATAACACAGGCGTTCACCCCGAAAGC
TACAAGAGTGCAAAAGAACTTTTAGGACTTCTTGAATATTCTGACAAAGAAATAAAATCAGGCAACTTCTCCGATATTCA
GCAGAGAGTAAAGGCAAAGGGAACAAAGTCACTTGCCGATGTTCTCGGAATCGGACTTCCGACCCTTAACGATATTGTAA
AGGAACTTTCCAAACCGGGCAGAGATCCCCGTGACGAACTGCCTGCACCAATGCTCAGAAGTGATATTCTCGACATCAAG
GATTTGAAAGAGGGGATGGAGCTTAAAGGCACGGTCAGAAATGTAATCGACTTCGGCGCATTTGTCGATATCGGCGTTCA
TCAGGACGGACTTGTTCATATTTCGCAGATTTGCGATAAGTACATCAAGCATCCGAGCGAAGTTCTCAAAGTCGGTGATG
TTGTAAATGTAAAGGTTCTTTCAGTTGATCCCGAAAAGAACAGAATTTCTCTCACAATGAGATTTTAA

Protein sequence :
MDYSQILSQQFNIKEEYAKNIITLLDDGNTIPFIARYRKEMHGSMDDQLIREFAEKLEYLRGLDKRRDEIRSLIDAQEKL
TDEINLALDKAATLSELEDIYRPYRPKRKTRASIAKEKGLEPLANNILKPEKGFDPSKSAVDYIDEEKGVTSVEDAIQGA
MDIIAELVSDNAEIRKRIRNLTNANGVLVSVATDEEKDSVYKNYYDYKEPVKKIAGHRVLAVNRGEKEGFLKVSVETDSE
KPLNSIFRAMITDKNQLCSDIIREACTDAYQRLIYPSIEREVRNDLTDTASENAVKVFAVNLKQLLMQPPVKGKTVLALD
PGYRTGCKTAVVDSTGKVLDTTVIYPTHSDKKIQESKQTLLRLIKKHHVDIISIGNGTASKETEMFTAETIKEADHPVYY
MVVSEAGASVYSASKLAATELPDLDLTLRSAVSIARRLQDPLAELVKIEPKAIGVGQYQHDMPQKKLGETLDGVVEDCVN
SVGADLNTASPALLSRVSGLNATVCKNIVAYREENGAFSSRAELKKVPKLGPKAFEQCAGFLRVPESRNPLDNTGVHPES
YKSAKELLGLLEYSDKEIKSGNFSDIQQRVKAKGTKSLADVLGIGLPTLNDIVKELSKPGRDPRDELPAPMLRSDILDIK
DLKEGMELKGTVRNVIDFGAFVDIGVHQDGLVHISQICDKYIKHPSEVLKVGDVVNVKVLSVDPEKNRISLTMRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 6e-149 47