Gene Information

Name : RO1_41550 (RO1_41550)
Accession : YP_007780108.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 4116785 - 4117615 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTGAATTTCGCAATGTTTCCGTTTCCTGTCAGCACATGCCGATCTTAAACGACATCTCATTAACTTTCCGTGACGG
GGAGATCACCACGATCCTTGGCCCGAACGGCTGCGGCAAGACTACCCTGGTCCAGTGCTTAAACGGTGCTTCCACGGTGA
CCGCCGGACAGATATTCTTAAACGGACAGGATTTTCTTAAAATTTCCCCGAAAGAACGTGCAAGAGAAATTTCCCTGCTC
CCACAGGTCCGCACGATCATTCCTGCTATTCCGGTTAAAATGCTTGTGGAACACGGGCGCTTTCCTTACCTTGGATTTTC
CCGCCGGAAATCAAAGGAGGACACTGAAATTGTAAACCGTGCCATGGAATTTACCCGCATCAGCCAGTATGCCGACCAGT
ATGTCGACACGCTCTCCGGCGGTATCAGACAGCGCGTGTTTTTTGCCATGGTGTTAGCGCAGGATTGTGATTACATCGTG
TTGGACGAGCCGACCACCTATCTCGACCTGACCGGGCAGCGCGAATTTTACGCCATGATAAAGGAATTAAAAAAACAGGG
AAAAACGATTATTCTGATCTTACATGATCTGAGTCAGGCGGTGCGCATCTCAGATACGCTGGTTGTCATGAACCGCGCCG
GTTCCAGATCTCTTGATAAAGCAGCGCATGCCGGTACAGACTCTGATGTTAAAGCAACTGATTTTCCCGGCAGCATCGCC
ATGGTTGGCACGCCCCAGGAGTGTCTGCAGTCGCATGTGATCGAGGATGTGTTTCAGACAAGCTGGAAAAGGTTTACGGA
TGAAGATGGGGAGTATTACTTTTTTGAGTAA

Protein sequence : 
MLEFRNVSVSCQHMPILNDISLTFRDGEITTILGPNGCGKTTLVQCLNGASTVTAGQIFLNGQDFLKISPKERAREISLL
PQVRTIIPAIPVKMLVEHGRFPYLGFSRRKSKEDTEIVNRAMEFTRISQYADQYVDTLSGGIRQRVFFAMVLAQDCDYIV
LDEPTTYLDLTGQREFYAMIKELKKQGKTIILILHDLSQAVRISDTLVVMNRAGSRSLDKAAHAGTDSDVKATDFPGSIA
MVGTPQECLQSHVIEDVFQTSWKRFTDEDGEYYFFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-37 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_41550 YP_007780108.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components BAC0164 Protein 3e-37 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_41550 YP_007780108.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components VFG1042 Protein 2e-37 46
RO1_41550 YP_007780108.1 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components VFG0925 Protein 2e-34 43