Gene Information

Name : RO1_04150 (RO1_04150)
Accession : YP_007776965.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 402054 - 404501 bp
Length : 2448 bp
Strand : +
Note : -

DNA sequence :
ATGCAGATACGATATACATCAAAAGCAAAAAAAGCAATCGATCAGGCTTCAAAGATGTCGAAATCACTGCATCATCATTA
TATCGGAACGGAGCATATCCTGATCGGACTTTTAAAAGAAGGAACGGGCGTCGCTGCGCAGGTATTAAATGATAATGGAG
TAGAACTTGACAAAGTCATGCAGCTGATCGAGGAACTCATTGCACCGGATGCACAGGTGCTGACGGCAGAGGCTAAGGAA
TATTCGCCGAGGGCACTGCAGGTGTTAGAAGGGGCAGCAAGGGAGGCAGCGCGTTTTCATGCAGAGGAGATCGGGACGGA
GCATATCCTGATCGCGATGATGAAAGAGACAGAGTGTGTGGCATCCCGCCTTTTAAATACCTTAGCGGTCAATATCCAGA
AAATGTATGTGGATATCCTGATCGCAATGGGAGAAGATGCGAGCCTGTACAAAGAAGATTTCATGAATGGTAAGCCGGTG
AAAAAAACAGCATCGGATACACCGGTATTAAATCAATACTCCAGAGATCTGACTGCATTGGCGGCAGAGGGAGTATTAGA
TCCGTTAGTCGGCAGACAGGAAGAGATCGGCCGTGTGATCCAGATCTTAAGCAGAAGGACAAAGAATAACCCATGTCTGA
TCGGTGAACCGGGCGTTGGAAAGACTGCGATCGTTGAGGGAATTGCGGAGCGTATTACAACCGGAATGGTTCCGGATACC
GTTGCGGGAAAGCGGGTGGTATCTTTGGATATGTCCGGAATCGTGGCAGGCTCAAAATATCGCGGTGAGTTTGAGGAGCG
CATTAAAAAGGTACTTCAGGAAGTACGGGCAGCCGGCAATATCCTGCTCTTCATCGATGAACTGCATACAATCATCGGAG
CGGGCGGAGCGGAAGGAGCAATCGATGCTTCCAATATATTAAAACCTGCACTTGCGCGTGGGGAACTGCAGCTGATCGGT
GCAACGACAATCGATGAATACCGCAAATATATTGAAAAAGATGCTGCGCTAGAGCGCAGATTCCAGCCGGTTACGGTAGA
AGAGCCGTCGGAAGAGGAGGCAGTGCAGATTTTAGAGGGACTGCGGGAACAGTATGAAAAACATCATCAGGTAAAGATTA
CGGATGATGCGGTATCGGCAGCAGTACGCCTGTCTGCGCGCTATATCAATGACCGTTTCCTGCCGGATAAAGCAATCGAT
CTGATGGATGAGGCTGCAGCAAAGGTACGTCTGCGCGCGGGTGGAAAACCGGAGGAAGTCGTTGAATTAAGACATCGCAT
CAACCTGTTAGAAGAGGAAATGTTAGAATTTCTGCACGATGGTGATGTGGAAGGTGCAAAGCAGAAGAAGAACGAAAAAG
AAGCGTGTGAAGAAGAGCTTGCCAAAATACAGGCAAAGACAAAGAAAGACAGCCGCAGTAAAAAGTTAAAAGTGACAGAA
GACGATATTGCGGATGTGGTATCCGGATGGACGAAGATCCCGGTAAGAAAGATTGCCGAGGGGGAGGCTGCCCGCTTAAG
AAAATTAGAGGCTACCTTACACAAACGTGTCATCGGTCAGGAGGATGCGGTGAGTGCAGTGGCAAAAGCTGTGCGAAGAG
GACGTGTCGGATTAAAAGATCCGAAGCGCCCGATCGGTTCTTTCCTGTTCTTAGGCCCGACCGGTGTCGGAAAAACAGAG
ATCTCAAAGGCACTTGCGGAGGCAGTGTTTGGCAGCGAACAGTCTATGATCCGTGTTGATATGTCGGAATATATGGAGAA
ACACAGCGTATCAAAGATGATTGGTTCACCGCCAGGATATGTAGGCCATGAGGAGGGCGGACAGCTCAGCGAAAAGGTGC
GCAGAAATCCGTATTCGGTGATCCTGTTTGATGAGATCGAAAAGGCGCATCCGGATGTATTTAATATTTTACTGCAGGTG
TTAGACGACGGTCATATCACGGATTCCCAGGGACGCAAAGTGGATTTCAAAAATACGATCATTATTATGACGTCAAATGC
CGGAGCACAGGCGATCATTGAGCCGAAAAAACTTGGATTTGCAGTTTCGGATGATGAAAAACAGAATTATGACCGCATGA
AAAACAGCGTGATGGAAGAAGTACGCCGTATTTTTAAACCGGAATTTTTAAACCGTATTGATGAGACGATCGTATTTAGA
GCGTTAAACAAAGACGATATGAAACAGATCGTTGCACTGATGTTAAAAGAACTTACAGACCGCTGTGAAAAACAGATGGG
AATCCACCTTACCGTGCGTGACAGCGTCAAAAAGCATATTGTCGAAAAAGCGTATGATCCGAAATATGGTGCAAGACCGC
TGCGCCGTCAGATCCAGAACGATATCGAGGATGAACTGGCAGAAGAAATCCTGTCCGGCAAAGTGAAAAAAGATACGGAA
GTGGTCGTGACGATCCACAAAGAAAAAGTCGTGTTCGAAACAAAATAA

Protein sequence :
MQIRYTSKAKKAIDQASKMSKSLHHHYIGTEHILIGLLKEGTGVAAQVLNDNGVELDKVMQLIEELIAPDAQVLTAEAKE
YSPRALQVLEGAAREAARFHAEEIGTEHILIAMMKETECVASRLLNTLAVNIQKMYVDILIAMGEDASLYKEDFMNGKPV
KKTASDTPVLNQYSRDLTALAAEGVLDPLVGRQEEIGRVIQILSRRTKNNPCLIGEPGVGKTAIVEGIAERITTGMVPDT
VAGKRVVSLDMSGIVAGSKYRGEFEERIKKVLQEVRAAGNILLFIDELHTIIGAGGAEGAIDASNILKPALARGELQLIG
ATTIDEYRKYIEKDAALERRFQPVTVEEPSEEEAVQILEGLREQYEKHHQVKITDDAVSAAVRLSARYINDRFLPDKAID
LMDEAAAKVRLRAGGKPEEVVELRHRINLLEEEMLEFLHDGDVEGAKQKKNEKEACEEELAKIQAKTKKDSRSKKLKVTE
DDIADVVSGWTKIPVRKIAEGEAARLRKLEATLHKRVIGQEDAVSAVAKAVRRGRVGLKDPKRPIGSFLFLGPTGVGKTE
ISKALAEAVFGSEQSMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQV
LDDGHITDSQGRKVDFKNTIIIMTSNAGAQAIIEPKKLGFAVSDDEKQNYDRMKNSVMEEVRRIFKPEFLNRIDETIVFR
ALNKDDMKQIVALMLKELTDRCEKQMGIHLTVRDSVKKHIVEKAYDPKYGARPLRRQIQNDIEDELAEEILSGKVKKDTE
VVVTIHKEKVVFETK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_04150 YP_007776965.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 54
RO1_04150 YP_007776965.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 2e-154 51