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Name : RO1_35260 (RO1_35260) Accession : YP_007779575.1 Strain : Roseburia intestinalis XB6B4 Genome accession: NC_021012 Putative virulence/resistance : Virulence Product : Predicted nucleoside-diphosphate sugar epimerases Function : - COG functional category : - COG ID : - EC number : - Position : 3497079 - 3498947 bp Length : 1869 bp Strand : + Note : - DNA sequence : ATGAAACAGTTAATTCAAGATAGACAGTTATTTATGCGCCGTATTTTTTTGATGTGTTATGACATGCTTGCTGTATTTGT TGCGAGTATGTTTGCGCTGATAATACGGTTTGATCTGAACTTTTACAATGTACCGACAGAATATCTGAATGAAGTATGGA GAACACTTCCGTATATGATGGTGATCACATTGATCATCTTCTGGGCACTCCGATTATATTCAAGTCTGTGGAGTTATGCA GGGGCACTTGAAATGATGTATGTTGTTTCGGCATGTATACTGGATGCGATCGTGGTAGCTGCATTGATCCTGGTACGTAA CTGGGGAGATATGTTCCCGGTTCCACGAAGCTTTTATATTTTATATGGGTTATTTTTACTTGTGCTGATCATGGGATGCA GATATTCCTATCGTGGACTTAGGGCAATCCGGAATATGCGAAGAGACGGCACATATCGTAGGAATGTACTGGTAATCGGT GCAGGTGAGGCTGGTAATCAGCTGATTAAAGAGATTAACAATAGCCGTTATGTAAAGAAAAAAGTTGTCGGTGTAATTGA TGATGATAAGACGAAGATTGGTAATTATATCCATGGAGCAAAGGTAATCGGTGACAGAAGCTGCATCCGGGATAAGGTGT TGGAACTGCATGTGCATGAGATCATTATAGCGATGCCATCAGCCTACCCGAAACAGATGAAGGGGATTCTTGATATTTGT AAAGAGACCGGCTGCGAATTAAAACGTCTGCCTGGAATCTATCAGCTTGTCAATGGTGAAGTTGGTATCAGCAAATTAAA AGATGTTGATGTAAATGATCTGCTTGGAAGAGAACCGGTCATGGTGAATCTTGAGTCTATCATGGGTTATGTGTCCGGGA AAGTTATCATGGTAACCGGCGGGGGAGGATCGATCGGAAGCGAGCTTTGCAGACAGATCGCAGGACACAAGCCAAAGCAG CTGATTATTTTAGATATTTATGAGAATACCACATATGATATACAGAATGAATTAAAGGTAAAATTCCCGGATCTTGATCT GGTTGTGCTGATCGGTTCTGTGCGGAATACCAATCGAATGAACTGGATCTTTGAGACCTATCATCCGGAGATCATTTACC ATGCGGCAGCTCATAAACATGTGCCGTTGATGGAGGAGAGCCCGAATGAAGCAATCAAGAACAATGTCCTTGGCACATGG AAAATCGTGCAGGCGGCAGACCGTTATCATGTAAAACGGTTTGTGATGATCTCTACCGATAAGGCGGTCAATCCGACCAA TATCATGGGCGCAAGTAAAAGAATCTGTGAAATGATCATTCAGACTTACAATAAGCGCTCTGAGACGGAATACGTGGCAG TGCGTTTTGGAAATGTACTTGGCAGTAACGGAAGCGTGATCCCTTTATTTAAAAAACAGATCGAACGTGGAGGCCCGGTG ACTGTCACAGATCCGAATATCGTGCGCTATTTTATGACAATACCAGAGGCTGTATCCTTAGTATTACAGGCGGGAGCCTA TGCAAAAGGCGGAGAGATTTTTGTTCTGGATATGGGAGAACCGGTCAAAATCCTTGATCTAGCCAAAAACCTGATTCTGT TATCCGGTCATAAACCGGATGAAGATATCCAGATCGTGTTTACCGGACTACGTCCTGGGGAAAAATTATACGAAGAGATG CTGATGGATGAAGAAGGACTGCAGGATACCGAGAATAACCTGATCCACATCGGAAAACCGATTGAACTGGATGAAGAGAA GTTTTTGGATCAGCTGGAAAAATTAAAAGAGTATGTTGTGACAGAACCTTCTGATATCAGGGAATGGGTAAAAGAAATTG TGCCGACGTATCAGCCGAAGGAGGAGTAG Protein sequence : MKQLIQDRQLFMRRIFLMCYDMLAVFVASMFALIIRFDLNFYNVPTEYLNEVWRTLPYMMVITLIIFWALRLYSSLWSYA GALEMMYVVSACILDAIVVAALILVRNWGDMFPVPRSFYILYGLFLLVLIMGCRYSYRGLRAIRNMRRDGTYRRNVLVIG AGEAGNQLIKEINNSRYVKKKVVGVIDDDKTKIGNYIHGAKVIGDRSCIRDKVLELHVHEIIIAMPSAYPKQMKGILDIC KETGCELKRLPGIYQLVNGEVGISKLKDVDVNDLLGREPVMVNLESIMGYVSGKVIMVTGGGGSIGSELCRQIAGHKPKQ LIILDIYENTTYDIQNELKVKFPDLDLVVLIGSVRNTNRMNWIFETYHPEIIYHAAAHKHVPLMEESPNEAIKNNVLGTW KIVQAADRYHVKRFVMISTDKAVNPTNIMGASKRICEMIIQTYNKRSETEYVAVRFGNVLGSNGSVIPLFKKQIERGGPV TVTDPNIVRYFMTIPEAVSLVLQAGAYAKGGEIFVLDMGEPVKILDLAKNLILLSGHKPDEDIQIVFTGLRPGEKLYEEM LMDEEGLQDTENNLIHIGKPIELDEEKFLDQLEKLKEYVVTEPSDIREWVKEIVPTYQPKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-89 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-95 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RO1_35260 | YP_007779575.1 | Predicted nucleoside-diphosphate sugar epimerases | VFG1300 | Protein | 1e-92 | 48 |
