Gene Information

Name : RO1_34230 (RO1_34230)
Accession : YP_007779487.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Unknown
Product : ABC-type metal ion transport system, periplasmic component/surface antigen
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3386298 - 3387251 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAAGAGTACTTACCACAATCTTAGCAGGCGTTTTAGCAGTATCTGCATTCGCAGGATGCGGCAGCAGCAACAC
AGCAGGCAATGCAGCTGCAGATAATAACGCAGCAGCAGAAACAAACGATGCAGCAGAAACAAATGATGCAGCAGTTGCAG
ACACCACTGCAGCAGAAAGTGAAGCAGCCGAGAGCGTAGCTGACACACAGACAACAGAGGGCGGCACGATTACCGTAGCA
GCTTCTGCAACACCACATGCAGAGATCTTAGAGGAAGCAAAGAAGATCCTTGCAGATCAGGGATGGGACTTAGAGATCAC
AATTTTTGATGATTACGTACTTCCAAACGAGGTAGTAGAGAGCGGCGAGTTCGACGCAAACTACTTCCAGCACATTCCTT
ACTTAGAGAACTTCAACGCAGAGAAAGGTACACACCTTGTCAATGCAGGCGGCATTCACTATGAGCCATTCGGAATCTAT
CCGGGAACAAAGAAAGATCTCTCTGAGTTAGCAGACGGCGATACGATCGCAGTACCAAACGATACCACAAACGAGGCAAG
AGCATTATTACTGTTACAGGATAACGGCATCATCACTTTAAAAGACGGCGCCGGCTTAGAGGCAACTGTCAACGATATCG
CTGAGAACCCGCACAACGTAAAGATCGAAGAGCTCGCAGCAGAACAGGTAGCAAGAGTGGCACCGGAAGTTGCATTCGTT
GTATTAAACGGTAACTACGCATTACAGGCAGGTTACTCTGTAGCACAGGATTCCTTAGCATACGAGACATCTGATTCTGA
GGCAGCAAAAACATATGTAAATGTCATCGCTGTAAAAGAAGGAAACGAGAACAACCCTGGCATCCAGGCACTTGTAAAAG
TATTAAAATCTGATGACATCAAGAAATTTATTAACGATACTTATGATGGAGCAGTTATTCCGTTTGAGGATTAA

Protein sequence :
MKKRVLTTILAGVLAVSAFAGCGSSNTAGNAAADNNAAAETNDAAETNDAAVADTTAAESEAAESVADTQTTEGGTITVA
ASATPHAEILEEAKKILADQGWDLEITIFDDYVLPNEVVESGEFDANYFQHIPYLENFNAEKGTHLVNAGGIHYEPFGIY
PGTKKDLSELADGDTIAVPNDTTNEARALLLLQDNGIITLKDGAGLEATVNDIAENPHNVKIEELAAEQVARVAPEVAFV
VLNGNYALQAGYSVAQDSLAYETSDSEAAKTYVNVIAVKEGNENNPGIQALVKVLKSDDIKKFINDTYDGAVIPFED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 1e-40 41