Gene Information

Name : RO1_30460 (RO1_30460)
Accession : YP_007779171.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3056387 - 3057067 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :

ATGGCTGTTTTAGAAGTGAAGGAATTAACAAAGAAATATGGTGAAGGCGAATCGGAAGTGATTGCGCTTGATCATGTGTC
TTTTTCGGTAGAAAGAGGAGAATTTGTTGCAATCATCGGAGCATCCGGTTCCGGGAAATCGACACTTATGAATATGATTG
GCGGAATTGATTATCCAACAAGCGGTTCTATTATCATTGATGGAAATGAGATACAAGCAATGAGTGAGGATGAACTTGCA
ATTTTCCGAAGAAGAAATCTGGGGATTGTTTATCAGTTTTATAATCTGATACCTACTCTTACTGCGGAGGAAAATATTGC
ACTGCCATGGAAATTAGATGGAAGAAAAGAGAATAAGGAACGGCTTTCTGAGATTGTGAATATGCTGGGGCTTGAGAAAA
GGGCAAAACATCTGCCAGGACAAATGTCAGGAGGTCAGCAGCAAAGAGTATCCATAGGAAGGGCACTTATAAACGAGCCG
GCATTTATTCTTGCAGATGAGCCGACGGGAAATCTTGATAGTAAAACAAGCAGAGAGATTCTGGATATTTTGAAGTTCAC
CAATCAGAAATATAAGCAGACGATTCTTCTTGTCACACATGACGAAAAGATAGCGCTGCAGGCGAACCGAATCATCACGA
TCGGAGATGGAAAAATCATAAAAGACGAGGTGATGAAGTAA

Protein sequence :

MAVLEVKELTKKYGEGESEVIALDHVSFSVERGEFVAIIGASGSGKSTLMNMIGGIDYPTSGSIIIDGNEIQAMSEDELA
IFRRRNLGIVYQFYNLIPTLTAEENIALPWKLDGRKENKERLSEIVNMLGLEKRAKHLPGQMSGGQQQRVSIGRALINEP
AFILADEPTGNLDSKTSREILDILKFTNQKYKQTILLVTHDEKIALQANRIITIGDGKIIKDEVMK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	4e-31	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-31	42
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-31	42
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	5e-31	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RO1_30460	YP_007779171.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	1e-54	56
RO1_30460	YP_007779171.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-53	53
RO1_30460	YP_007779171.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	4e-34	45
RO1_30460	YP_007779171.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	6e-37	44
RO1_30460	YP_007779171.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-35	42