Gene Information

Name : RO1_02930 (RO1_02930)
Accession : YP_007776865.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 273518 - 275296 bp
Length : 1779 bp
Strand : +
Note : -

DNA sequence :
ATGTTTAGAAAAACAAAAATTGTTTGTACTTTAGGACCTTCAACAGATAAGGAAGGTGTATTAAAACGCCTGATCGAAGA
GGGAATGAACGTTGCCCGTTTTAATTTTTCCCATGGTGACCATGAGGAGCAGTTAGGACGCCTTCAGATGTTACAGAAAC
TTCGTAAGGAATTAAAGCGTCCAGTCGCAGCACTGCTTGACACAAAAGGACCGGAGATCCGCCTGAGAGATTTTACGGAC
GGAAAAGTCGAACTTAAGGATGGACAGACTTTTACCCTGACAACCGATGAGATTATGGGAGATGCAAAACGTGTTTCCAT
TACTTATAAAAACCTGCCGGAGGATGTAAAACCGGGAGATCGCATTCTGATCGATGATGGTCTGATCGGAATGGAAGTAA
AAGAAATCAAGGTGACATCTGGCGCAAAGGCAGATAAAGATGGCAATAAGCCAAAAGATATCATCTGCCAGGTGTTAAAT
GGCGGTGTGATTTCCAACAGAAAAGGCGTGAACGTTCCGAATGTAGAATTGTCCATGCCATATATCAGCGAAAAAGATTA
TGGTGATATCGTATTTGCGGTAGAGCATGATTATGATTTTATTGCTGCATCTTTTGTCCGTACCGCAGATGATGTGCTTG
CAATCCGCAAGATCCTTGCAGAAAAAGGCGGCGAGGATATCAATATCATTGCAAAAATTGAAAATATGCAGGGTGTACAG
AATATTGACGATATTATCCGTGTTTCCGATGGAATCATGGTAGCGCGTGGTGATATGGGTGTTGAGATCCCGTTAGAGGA
TGTACCGGTGATCCAGAAGATGATCATTAAAAAAGTATACGATGCAGGCAAGAAGGTTATCACAGCGACTCAGATGCTTG
ATTCCATGATGAAACATCCGCGTCCGACCAGAGCAGAGGCAACTGACGTTGCAAATGCAATCTACGACGGAACCAGTGCG
ATCATGCTCTCCGGAGAGACAGCTGCAGGTATGTATCCGATCGAGGCTTTAAAGACCATGGTGCGTATTGCAGTCCGTAC
GGAACAGGATATCAATTACTTACAGCGTTTTAAAATGCGCAAAACCATGAGCAACCCGGATGTGACCAATGCAATCTCCC
ATGCGACATGTACAATGGCGGGAGATTTGAATGCGGCAGCAATCATCACGGTAACAAAATCAGGACGTACCGCCCGCATG
GTTTCCAAATATCGTCCAAACTGTCCGATTATCGGAGGATGTCTGACAGAAAAGATTTACCGTCAGCTTGCATTATCCTG
GGGTGTGATCCCGCTTATGATCGAGGAAAAGACACAGGCAGAAGAACTGTTTGACTATGCAGTCGATGCAGCAGAAGCAG
CAGGAATCATTTCCAAGGGCGATGTTGTTGTCTTAACCGCAGGAGTTCCTCTTGGTGTATCCGGTACGACCAACCTGATC
AAGGTGCAGGTGGCAGGACATATCTTAGTGGAGGGACAAGGAATCGGAACACAGAAGATTTCTGCAAATCTCTGCGTTTG
TCACAATGAAGAAGATCTTAAAAACTTTAAAGTCGGGGACATCATTGTTGCAAAAGATACCAGCAATGCCATGATGACAC
AGATGCGTGAGGCATCCGGACTCATCGTGGAAGCATCCGGTGAAAACTGCCACGCAGCAATCGCAGGATTAAGCCTTGAT
ATTCCGGTTCTGATCGGTGCTAAACATGCGCTTGATGTCTTAAAATCCAGTGCATATGTAGAATTGGATTGTGAGAACGG
ACTTGTGACAGCAAATTAA

Protein sequence :
MFRKTKIVCTLGPSTDKEGVLKRLIEEGMNVARFNFSHGDHEEQLGRLQMLQKLRKELKRPVAALLDTKGPEIRLRDFTD
GKVELKDGQTFTLTTDEIMGDAKRVSITYKNLPEDVKPGDRILIDDGLIGMEVKEIKVTSGAKADKDGNKPKDIICQVLN
GGVISNRKGVNVPNVELSMPYISEKDYGDIVFAVEHDYDFIAASFVRTADDVLAIRKILAEKGGEDINIIAKIENMQGVQ
NIDDIIRVSDGIMVARGDMGVEIPLEDVPVIQKMIIKKVYDAGKKVITATQMLDSMMKHPRPTRAEATDVANAIYDGTSA
IMLSGETAAGMYPIEALKTMVRIAVRTEQDINYLQRFKMRKTMSNPDVTNAISHATCTMAGDLNAAAIITVTKSGRTARM
VSKYRPNCPIIGGCLTEKIYRQLALSWGVIPLMIEEKTQAEELFDYAVDAAEAAGIISKGDVVVLTAGVPLGVSGTTNLI
KVQVAGHILVEGQGIGTQKISANLCVCHNEEDLKNFKVGDIIVAKDTSNAMMTQMREASGLIVEASGENCHAAIAGLSLD
IPVLIGAKHALDVLKSSAYVELDCENGLVTAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-93 48
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-94 48
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-94 48
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-94 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_02930 YP_007776865.1 pyruvate kinase VFG0479 Protein 2e-94 48