Gene Information

Name : RO1_20990 (RO1_20990)
Accession : YP_007778405.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 2118285 - 2119469 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTGCAATCGCAGGAATAGGATACGTTGGTTTGTCCAATGCAATTTTATTAGCGCAGCATCATGAGGTGACTGC
AGTTGATATAATAGAAGAAAAAGTGGAGATGATCAATCAGCGCAGATCACCGCTGGTGGATCGTGAGATTGAGGATTATC
TGGCAAATGCAAAACTGGATCTGACTGCAACGACAGACGGTGTACATGCATATGAAAACGCAGATTATGTTATTATCTCG
ACACAGACAAATTATGATGAAAAGAAAAATTATTTTGACACCTCATCCGTTGAGGAAGTATTAGAACTGGTCTTAAAGGT
AAATCCGCATGCGGTGATTGTCATCAAATCCACGATCCCGGTCGGTTATACACAGTCTGTGTGTGAGAAGTATCACACGG
ATCGTATTCTTTTCTCACCAGAGTTTTTACGGGAAGGACAGGCGTTAAAAGATAATCTTTATCCTTCAAGGATCATTGTC
GGTTCGAAAGAGGGAAGCAGTGAGATGAAAAAAGCAGCGGAGAAATTTGCACATCTGCTGCAGGAGGGTGCAATCAAGGA
AGATATCCCGACACTTCTGACGAACCTTACGGAAGCGGAGGCAGTGAAACTTTTTGCAAACACATACCTTGCACTCCGTG
TTTCATTTTTCAATGAACTTGATACGTTTGCTGCCATGAAAGGACTGGACGCAAAGCAGATCATTGAGGGAATCGGACTT
GATCCGAGAATCGGAATGCAGTATAACAACCCTTCCTTTGGATATGGCGGTTACTGTCTGCCGAAAGATACCAAGCAGCT
TCTGGCAAACTATGACAATGTGCCGAATAATATTGTTGGTGCGATCGTTGATGCAAACCGGACAAGAAAAGATTTTATAG
CAGAACAGATCCTTGAGAAAAATCCGAAGACGGTCGGCATTTACCGTCTTGCGATGAAGGCAAATTCGGATAATTACAGG
CAGAGTTCTATTTTAGGGGTTATGGAGCGTATTCGTGCAAAGGGTGTGAACATTGTCATTTATGATCCGTCATTAAAGAC
AGATACGTTTGAAAATTCCAAAGTGATCCGTGATTTTGATGAGTTTTGTAATATGAGTGATGTGATCGTGGCAAACCGTA
TGGATAACATGTTGTCAGATGTAAAAGAAAAGGTGTATACAAGAGACATTTATTTCAGAGACTGA

Protein sequence : 
MKIAIAGIGYVGLSNAILLAQHHEVTAVDIIEEKVEMINQRRSPLVDREIEDYLANAKLDLTATTDGVHAYENADYVIIS
TQTNYDEKKNYFDTSSVEEVLELVLKVNPHAVIVIKSTIPVGYTQSVCEKYHTDRILFSPEFLREGQALKDNLYPSRIIV
GSKEGSSEMKKAAEKFAHLLQEGAIKEDIPTLLTNLTEAEAVKLFANTYLALRVSFFNELDTFAAMKGLDAKQIIEGIGL
DPRIGMQYNNPSFGYGGYCLPKDTKQLLANYDNVPNNIVGAIVDANRTRKDFIAEQILEKNPKTVGIYRLAMKANSDNYR
QSSILGVMERIRAKGVNIVIYDPSLKTDTFENSKVIRDFDEFCNMSDVIVANRMDNMLSDVKEKVYTRDIYFRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-84 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_20990 YP_007778405.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-96 55