Gene Information

Name : RO1_14760 (RO1_14760)
Accession : YP_007777867.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.4
Position : 1479834 - 1481135 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
ATGTATGACCTGATTGAAAAGAAAAAACTTGGCATGGAACTGACCACAGATGAGATCCGTTTTATGATCGATGGTTTTAC
GGACGGTACGATTCCGGATTATCAGATGTCTGCCATGACGATGGCGATCTGTTTTCAGGGAATGAGTAAACGGGAAACGG
TCGACCTGACACTTGCCATGCGTGACAGCGGGGATGTGCTCGATCTCTCTTCCATTCCGGGTGTGAAAGTAGATAAACAC
AGTACCGGCGGTGTGGGAGATAAGACATCGTTAGCGCTGACACCGATCATTGCTTCTCTTGGAGTTCCGGTTGCAAAGAT
GTCTGGAAGAGGACTTGGCCATACCGGAGGAACCATTGACAAACTTGAGAGTTTTCCGGGATTTACGACTGCGCTTCCGG
AGAAAATCTTTTTTAAAAATGTCCGTGAGATCGGTATTGCACTGGCAGGGCAGACGGCCAATCTTGCCCCGGCGGATAAA
AAGCTGTACGCACTGCGTGATGTCACGGCTACCGTCGATCAGATGTCACTGATTGCCAGCTCGATTATGAGCAAAAAATT
AGCTTCCGGCAGTGATGCAATCGTGCTCGACGTCAAGACCGGAAACGGCGCATTTATGAAAAAATATGAGGACTCTGTCG
CACTTGCAAAAGAGATGGTGTCGATCGGAACGATGGCAGGCAAAAAGACGGCGGCAGTCATCACGGATATGGACCAGCCG
CTTGGAAATGCCGTTGGAAATGCCATCGAAGTGATCGAGGCGGTCGACACCTTAAAAGGAGAAGGCCCTTCGGATTTTAA
AGAGGTAGTCTTTGCACTGGGGGCCCAGATGTTACTCTTTGCAGGACGTGCAGATTCATGCGAAGAGGCGGTAAAACTCA
TGCAGGATTCCATAGACAGTGGAGCTGCGCTTGATAAAATGGCTGAGTTTGTGAGAGCGCAGGGTGGGGATGCATCTTAT
GTATATGACACTTCAAAGTTCCCAAAAACAAAATATTCGGTCGAAGTAAAAGCAGCGTGCGGCGGATTCGTGCATCGCAT
TCTGGCGGAAAATATTGGCATTGCCTGTATGACACTTGGCGGTGGACGTGAAACGAAGGACAGTGTGATCGATCTTTCTG
TTGGCATTTATTTAAAGAAGAAAAATGGAGATGCTGTAGATACCGGTAACACACTGGCAGTCATTTATGCAAATGATCGT
GAAAAAATGGATGCGGCTGCCGAAAAAGTACTGCATGCTTATGAAATTGCTGCCGTGCCGAAAGAAATGCTGCCGGTCGT
AAGAGAATATATTTACGAATAA

Protein sequence :
MYDLIEKKKLGMELTTDEIRFMIDGFTDGTIPDYQMSAMTMAICFQGMSKRETVDLTLAMRDSGDVLDLSSIPGVKVDKH
STGGVGDKTSLALTPIIASLGVPVAKMSGRGLGHTGGTIDKLESFPGFTTALPEKIFFKNVREIGIALAGQTANLAPADK
KLYALRDVTATVDQMSLIASSIMSKKLASGSDAIVLDVKTGNGAFMKKYEDSVALAKEMVSIGTMAGKKTAAVITDMDQP
LGNAVGNAIEVIEAVDTLKGEGPSDFKEVVFALGAQMLLFAGRADSCEEAVKLMQDSIDSGAALDKMAEFVRAQGGDASY
VYDTSKFPKTKYSVEVKAACGGFVHRILAENIGIACMTLGGGRETKDSVIDLSVGIYLKKKNGDAVDTGNTLAVIYANDR
EKMDAAAEKVLHAYEIAAVPKEMLPVVREYIYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 7e-72 42