Gene Information

Name : RO1_12240 (RO1_12240)
Accession : YP_007777640.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1226417 - 1227301 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence :
ATGACACATGACATTATGGATTTTATTGAATATATTCACAATGAAAAACAGACATCAAAGAATACGGAAGTTTCCTATGA
ACGTGATCTCCGCAAGATGAATGAATATCTGGAAGCGCAGAATGTATACGGGGTGTCTGCCGTTACGGAGACAAATCTGA
ATGCATATGTTATGTTTTTAGAACGTGAAGGACGGAAACCGGCGACGGTTTCAAGGAGCATTGCATCAATGAAAGCTTTT
TTTCATTTTCTTGAAAAGGAGCGGAGAATCGAGTCGGATCCGGCATGGCGTTTGAAAGCACCTAAGATTGAAAAAACGAT
GCCGCGTATCCTGACCACGGAAGAAGTGACGCTTTTGTTAGAGCAGCCGTCCGGAAATACACCGAAAGAGCTGCGGGATA
AGGCGATGCTTGAATTGCTTTACGCGACAGGAATCCGTGTGTCGGAGCTGATATCGTTAAAAGTCTCGGATCTGAATCTT
CAGATGGAGTATGTGATCTGTACGGATATCCATAAAGAACGGATCATTCCATTTGGGAATGTCGCAAGGGAGGCACTGAC
AAGATATATGCAGGATGGAAGAGATCATCTGATCAGCCAGGCGGACTGTCCGTGGCTGTTTACGAATTGTACCGGTGGTG
CAATGAGCCGTCAGGGTTTCTGGAAACTGATCAAGTTTTATGGGAAGAAGGCGGGGATCGAATCAGAGATCACACCGCAT
ACGCTGCGCCATTCGTTTGCGGCACATCTGATCAGCAATGGAGCAGATTTAAAGTCGGTGCAGGAGATGTTAGGACATTC
TGATATTTCTACGACACAGATTTATTCGCAGATGGGGCAGGGAAGAATCCGGGAAGTGTATCTGAAAGCACATCCGAGAG
GATAG

Protein sequence :
MTHDIMDFIEYIHNEKQTSKNTEVSYERDLRKMNEYLEAQNVYGVSAVTETNLNAYVMFLEREGRKPATVSRSIASMKAF
FHFLEKERRIESDPAWRLKAPKIEKTMPRILTTEEVTLLLEQPSGNTPKELRDKAMLELLYATGIRVSELISLKVSDLNL
QMEYVICTDIHKERIIPFGNVAREALTRYMQDGRDHLISQADCPWLFTNCTGGAMSRQGFWKLIKFYGKKAGIESEITPH
TLRHSFAAHLISNGADLKSVQEMLGHSDISTTQIYSQMGQGRIREVYLKAHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-42 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-42 42