Gene Information

Name : EUS_27210 (EUS_27210)
Accession : YP_007776549.1
Strain : Eubacterium siraeum 70/3
Genome accession: NC_021011
Putative virulence/resistance : Virulence
Product : type III secretion system ATPase, FliI/YscN
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 2848331 - 2849635 bp
Length : 1305 bp
Strand : -
Note : -

DNA sequence :
ATGGATCTCGGCGGATTTCTGACAGAACTCAGAACTACCGATACATATAAGTATCTGGGTAAAATTGAAAAGATAGTCGG
AATGACAATCGAGGCGAGCGGACCGCTGTGCAGTATAGGCGATGTGTGCCGTATCTACACAAAGGATATGAAGTCGCATA
TCCCTGCCGAAGTGGTGGGATTCAACGAGCATAAGGTACTGCTTATGCCGTATACCGACCTTGAGGGCATAGGTCCCGGC
AGTATAGTTGACAACACCGGCGACAAACTGAACGTAAGAGTCGGCGACAAGCTGATAGGAAGAATAATCGACGCACTGGG
AAATCCGCTTGACGACGGAGAGCCGATTGAATATACAGACACCGTGCCTATAGCGGGCATTCCTGTAAATCCGCTCACCA
GACCGAAAATACACGAGCCTATAGAGCTTGGCGTAAAGGCGATCGACGGACTTCTCACAATGGGCAAGGGGCAGAGAATG
GGTATCTTTGCCGGCTCAGGCGTAGGTAAGTCAACGCTTATGGGTATGATCGCACGAAAGGTAAAGGCCGATCTCAACGT
TATAGCGCTTGTAGGCGAGCGTGGCAGAGAGGTAAGAGAATTTATAGAAAACGACCTCGGAGAAGAAGGTATGGCAAGGT
CGGTCGTTGTTGTCGCAACATCGGATCAGCCTGCGATGATGAGAAATAAATGTCCTATGACGGCTACGGCTATAGCGGAA
TATTTCTGTTCTCAGGGCAAGGATGTTCTGCTGATGATGGATAATCTTACACGTTTTGCTATGGCACAGCGTGAGATAGG
TCTTTCGACAGGCGAGCCTCCCGTTGCAAGAGGCTATACTCCGTCAATATACGCCGCAATGCCAAAGCTGCTCGAAAGGG
CGGGAAACTTCGAAAAGGGCAGTATAACAGGAATTTATGCTGTGCTTGTTGAGGGTGACGATACAAATGAGCCTATATCG
GATACCGTAAGAGGTATAATTGACGGACATATAGTGCTGAGCCGTAAGATAGCGGCGCAGAACCATTATCCTGCAATTGA
CATACTGCCGAGCATCTCACGTCTTATGTCGGCAATTGCAGATCCGGAGCATAATAAAGCGGCAGGAAAGCTGAGAAATC
TGCTTGCGCTTTACAACAACAACGCAGACCTTATCTCGATAGGAGCGTACAAGAAGGGTACAAACCCGGCTCTTGACGAG
GCAATAAAGAAGATAGACAAGATAAACGATTTTCTGATGCAGGGAATGTATGAATCGTTCTCGATGGAGGATACCATAAA
GCTGTTAAAGGCGGCGGTTTCCTGA

Protein sequence :
MDLGGFLTELRTTDTYKYLGKIEKIVGMTIEASGPLCSIGDVCRIYTKDMKSHIPAEVVGFNEHKVLLMPYTDLEGIGPG
SIVDNTGDKLNVRVGDKLIGRIIDALGNPLDDGEPIEYTDTVPIAGIPVNPLTRPKIHEPIELGVKAIDGLLTMGKGQRM
GIFAGSGVGKSTLMGMIARKVKADLNVIALVGERGREVREFIENDLGEEGMARSVVVVATSDQPAMMRNKCPMTATAIAE
YFCSQGKDVLLMMDNLTRFAMAQREIGLSTGEPPVARGYTPSIYAAMPKLLERAGNFEKGSITGIYAVLVEGDDTNEPIS
DTVRGIIDGHIVLSRKIAAQNHYPAIDILPSISRLMSAIADPEHNKAAGKLRNLLALYNNNADLISIGAYKKGTNPALDE
AIKKIDKINDFLMQGMYESFSMEDTIKLLKAAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 9e-97 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-94 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-94 53
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-94 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-94 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-94 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-94 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-94 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-92 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-92 52
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-81 48
escN AAC38383.1 EscN Virulence LEE Protein 1e-81 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-81 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-82 48
escN CAI43874.1 EscN protein Virulence LEE Protein 9e-82 48
escN AAC31513.1 L0034 Virulence LEE Protein 8e-82 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 8e-82 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-81 48
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-79 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 9e-79 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-78 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-78 48
escN AAK26715.1 EscN Virulence LEE Protein 1e-81 47
escN AAL57542.1 EscN Virulence LEE Protein 1e-81 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-81 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-81 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-73 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-73 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-73 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-74 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-73 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-77 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-69 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-78 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-66 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-70 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-70 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 7e-71 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-73 43
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-73 43
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-73 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-64 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-64 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0192 Protein 2e-97 53
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG2144 Protein 4e-99 52
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0048 Protein 6e-93 52
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0390 Protein 1e-93 51
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0730 Protein 8e-82 48
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0812 Protein 5e-82 48
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG1254 Protein 8e-91 48
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG2499 Protein 4e-82 48
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG2331 Protein 4e-82 47
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG0515 Protein 9e-74 46
EUS_27210 YP_007776549.1 type III secretion system ATPase, FliI/YscN VFG1778 Protein 5e-69 43