Gene Information

Name : EUS_22870 (EUS_22870)
Accession : YP_007776180.1
Strain : Eubacterium siraeum 70/3
Genome accession: NC_021011
Putative virulence/resistance : Virulence
Product : Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2372143 - 2373834 bp
Length : 1692 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAACATACCGATAGGACAGATTCTTGTTGAGAACGGATTTCTGAAAGAGGATCAGCTTGAAGAAGCCCTTGAAAA
ACAGCGCAGTGAGCCGGGTAAAAAGCTCGGCGACGTATTGCTCGAGCTGGGCTATGTTTCAGAAACACAGCTTGCGCAGG
CACTGTCTATCCGTCTTAAAGTGCCGTTCATCGACCTCACAACCACAAAGATCGATATAGAGGCAGTCAAGAAGATACCT
GAGGCTATAGCAAAGAAGAACTGCTGTGTAGCGTTCCAGATGAACGATTCACGTCTTACTGTTGCTACAGACGATCCTAT
CAACTTCTACATATTCGAGGAGCTGAAGGTTATCTCCGGTATGGAGATACACGCAATGATAGCTACCCGTACAGCTATCA
ACGAAACTATCAGCAAGGCATATTCACAGCAGACCGTAAGCAATGTTATGGATAACCTCAATAAAGAGTACAACAATGCT
ACGGACAATGTTATCCAGGACGACCCCGAATCAGGCGAGCGTGTTGATAATGCACCTATCGTTAAGCTGGTAAATACAAT
AGTTGAAACCTCATTCAGAATGAATGCGTCGGATATTCATATAGAGCCTTTCAAGGACAGAACAAGAATAAGGCTCAGAG
TAGACGGCGAGCTTATCGAGCAGATGAAGGTAAAGCCTGCCGCACATAACTCGCTTATCACCCGTATAAAGATACTCGGC
GGTATGAACATTGCCGAAAAGAGAATACCTCTTGACGGCCGTTTCGGTATGACCATCGACGGCGTAAACCTTGACGTCCG
TGTATCTACCATACCTACCGTTTACGGTGAGAAGTGCGTTATCCGTCTGCTTTCAACGGCAGATGAAAAGACAAGAAAGA
TAACCGACCTCGGTATGACGCTGTACAACTACGAAATGTTCAAGCAGATTATACGTTGCCCGCACGGAGTTATGCTGGTT
ACGGGACCTACAGGTTCGGGTAAATCTACAACACTGTACGCAACGCTCGGTGAGCTTTCAAAACCCAACGTTAACATAGT
TACTGTTGAGGACCCTTGCGAAAAGAAGATAGACGGTGTAAACCAGGTACAGATAAACGCAAAAGCAGGTCTTACATTTG
CGGCGGCTCTGCGTTCTATTCTCCGTCAGGACCCGGATATAGTAATGGTCGGTGAGATTCGTGACGGTGAAACGGCAGAC
ATCGCTATCCGTGCCGCTATCACAGGTCACTTGGTTCTTTCGACCCTCCATACAAACGACGCCGCAGGTACTATCCTCCG
TCTTGTTGATATGGGTGTTGCGCCTTACATGGTTGCATCATCTCTTGTCGGAGTTATCGCTCAGCGACTTGTAAAGCTGC
TTTGCCCGGAGTGCAAGGAGAAGGTAATGCTTACCGATCCTGCCGACTTAAGACTTGTCGGAAAGACAGAGCCGGTCGAA
ATATGCAAGGCTCATTACGGCGGATGCCGCTCATGCCATAATACAGGCTATAAGGGCAGAACCGCTATCCACGAGATAAT
AGTAAGCTCGAACGATATAAAGGAGCTTATCTCAAGCGGCGCAACAGCCGAGCAGATAGGCGCACAGGCTGAAAAGAACG
GAACAAAGCTGCTGAGAAGCAACGTTACCGATATGGTGCTTGCAGGCACTACAACGCTTGACGAACTGGTAAAAGCCACC
TACTCCGTATAA

Protein sequence :
MKNIPIGQILVENGFLKEDQLEEALEKQRSEPGKKLGDVLLELGYVSETQLAQALSIRLKVPFIDLTTTKIDIEAVKKIP
EAIAKKNCCVAFQMNDSRLTVATDDPINFYIFEELKVISGMEIHAMIATRTAINETISKAYSQQTVSNVMDNLNKEYNNA
TDNVIQDDPESGERVDNAPIVKLVNTIVETSFRMNASDIHIEPFKDRTRIRLRVDGELIEQMKVKPAAHNSLITRIKILG
GMNIAEKRIPLDGRFGMTIDGVNLDVRVSTIPTVYGEKCVIRLLSTADEKTRKITDLGMTLYNYEMFKQIIRCPHGVMLV
TGPTGSGKSTTLYATLGELSKPNVNIVTVEDPCEKKIDGVNQVQINAKAGLTFAAALRSILRQDPDIVMVGEIRDGETAD
IAIRAAITGHLVLSTLHTNDAAGTILRLVDMGVAPYMVASSLVGVIAQRLVKLLCPECKEKVMLTDPADLRLVGKTEPVE
ICKAHYGGCRSCHNTGYKGRTAIHEIIVSSNDIKELISSGATAEQIGAQAEKNGTKLLRSNVTDMVLAGTTTLDELVKAT
YSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-88 42
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-88 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EUS_22870 YP_007776180.1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG1876 Protein 2e-76 45
EUS_22870 YP_007776180.1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2426 Protein 2e-70 44
EUS_22870 YP_007776180.1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG0182 Protein 4e-88 44
EUS_22870 YP_007776180.1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG0233 Protein 9e-76 44
EUS_22870 YP_007776180.1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2048 Protein 4e-88 42