Gene Information

Name : CC1_08240 (CC1_08240)
Accession : YP_007769100.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 863251 - 863916 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence :

ATGAGCGTTTTACAGGCGATTGATCTGAAAAAGTATTACGGCACAGAGCCGAACATTACCCGCGCCCTTGACGGTGTGAA
CTTCTCCGTGGAGGACGGCGAGTTTGTGGCTGTTGTGGGAACATCCGGCAGCGGCAAGTCCACCCTGCTTCACATGATGG
GCGGGCTGGACACTCCCACCAGCGGAACCGTGATCGTCCGGGGCGAAGAACTGGCAAAGAAGAACGATGAACAGCTTACC
ATCTTTCGCCGCCGCAACATCGGCTTTATCTTCCAGAACTATAACCTTGTTCCTATTCTAAATGTGTATGAGAACATCGT
CCTGCCGGTGGAGCTGGACGGGGACACGGTGGATCAGAAGTTTTTGGACGAAATTGTTCACCTACTGGGGCTGGAAGATA
AACTGAAAAATATGCCGAACAATCTATCCGGCGGACAGCAGCAGCGTGTGGCGATTGCCCGCGCTCTGATTACCAAACCG
GCTATTGTGCTGGCCGATGAGCCAACCGGTAACCTTGACAGCAAGACCAGCGCCGAGGTGCTGGGACTTATCAAGCGCAC
CAGCGCGGAGTTCCGGCAAACCGTTGTAATGATTACCCACAATGACGACATAGCCCGCCTTGCAGATCGGATTGTCCGCA
TTGAGGATGGCAGGATTGTGGAATAA

Protein sequence :

MSVLQAIDLKKYYGTEPNITRALDGVNFSVEDGEFVAVVGTSGSGKSTLLHMMGGLDTPTSGTVIVRGEELAKKNDEQLT
IFRRRNIGFIFQNYNLVPILNVYENIVLPVELDGDTVDQKFLDEIVHLLGLEDKLKNMPNNLSGGQQQRVAIARALITKP
AIVLADEPTGNLDSKTSAEVLGLIKRTSAEFRQTVVMITHNDDIARLADRIVRIEDGRIVE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-37	45
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-38	45
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-38	45
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	6e-38	45

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CC1_08240	YP_007769100.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	2e-83	75
CC1_08240	YP_007769100.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	3e-57	53
CC1_08240	YP_007769100.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	3e-35	42
CC1_08240	YP_007769100.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	1e-35	41