Gene Information

Name : CC1_04400 (CC1_04400)
Accession : YP_007768777.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 467574 - 468818 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAAACAGTATAAAATTGCAGTAGCAGGAACAGGATATGTAGGATTATCAATTGCAACTCTTTTATCGCAGCATCA
TCAGGTAACAGCGGTTGATATTGTACCGGAAAAAGTAAAACTGATTAATGAGAAGAAATCTCCGATTCAGGATGATTATA
TTGAAAAATATTTGGCTGAGAAAGAGTTGAATCTAACTGCAACATTAGATGCAGAGTCAGCATATAAAGATGCAGATTTT
GTAGTCATTGCAGCACCAACCAATTATGATTCGAAGAAAAATTTCTTTGATACATCAGCAGTAGAGAATGTCATTGAATT
AGTCATTAAATATAATCCAGACGCAGTAATGGTTATCAAATCTACAATTCCTGTAGGCTACACAAAGTCAGTCCGTGAAA
AATTCCATTGTGATAATATTATTTTCAGTCCGGAATTTTTACGTGAATCTAAGGCATTGTATGATAACCTTTATCCGTCA
AGAATTATTGTGGGTACAGATGTAGAAAATGTACGTTTGGTGAAAGCTGCCAATACTTTTGCATCTTTATTGCAGGAAGG
TGCGATTAAAGAAGATATTGATACATTGATTATGGGATTTACAGAAGCGGAAGCAGTCAAATTATTTGCTAATACATATT
TGGCTCTTCGTGTATCCTATTTCAATGAACTTGACACTTATGCAGAATCAAAAGGTTTGAATACACAGCAGATTATTGAT
GGTGTGTGTCTGGATCCACGTATTGGATCTCACTATAACAATCCTTCTTTTGGTTATGGCGGTTATTGCTTACCGAAAGA
TACAAAACAGCTTTTAGCTAATTATGCAGATGTACCGGAGAATTTGATTGAAGCCATTGTAGAAAGCAATAGAACAAGAA
AAGATTTTATTGCAAATCGAGTGCTTGAAATTGCTGGTGGTTATGAAGCAAATGACAGCTATGACGCTGCAATGGAGAAA
GAAGTCGTTGTTGGTGTATACCGTTTAACAATGAAGTCTAATTCAGATAATTTCCGTCAGTCATCTATTCAGGGAGTTAT
GAAACGAATCAAAGCTAAAGGTGCCACGGTTGTTATTTATGAGCCGACGCTGGAAGATGGTACAACATTCTTTGGCAGCA
AGGTTGTCAATGATATGGATAAGTTCAAAGAAATGAGTCAGGCAATTATTGCGAATAGATATGATAGCTGTCTGGACGAT
GTAAAAGATAAAGTGTATACAAGAGACATTTTTAGAAGGGACTAG

Protein sequence :
MEKQYKIAVAGTGYVGLSIATLLSQHHQVTAVDIVPEKVKLINEKKSPIQDDYIEKYLAEKELNLTATLDAESAYKDADF
VVIAAPTNYDSKKNFFDTSAVENVIELVIKYNPDAVMVIKSTIPVGYTKSVREKFHCDNIIFSPEFLRESKALYDNLYPS
RIIVGTDVENVRLVKAANTFASLLQEGAIKEDIDTLIMGFTEAEAVKLFANTYLALRVSYFNELDTYAESKGLNTQQIID
GVCLDPRIGSHYNNPSFGYGGYCLPKDTKQLLANYADVPENLIEAIVESNRTRKDFIANRVLEIAGGYEANDSYDAAMEK
EVVVGVYRLTMKSNSDNFRQSSIQGVMKRIKAKGATVVIYEPTLEDGTTFFGSKVVNDMDKFKEMSQAIIANRYDSCLDD
VKDKVYTRDIFRRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-82 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC1_04400 YP_007768777.1 nucleotide sugar dehydrogenase VFG0963 Protein 7e-109 59