Gene Information

Name : CC1_34440 (CC1_34440)
Accession : YP_007771378.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3515086 - 3517530 bp
Length : 2445 bp
Strand : +
Note : -

DNA sequence :
ATGCAATATAGATTTACACAAATGGCAGCCAATGTGATGCATTATTCAAAGGAGGTTGCAGCAGAACTGAATCACAGTTA
TATCGGAACAGAACATATTCTGATTGGATTGCTGCGAGAGAAAGAGGGACTGGCATGCCAGGTGCTGGAAGATCATGATG
TGACAGAGGAGAAGGTACTGCACATGGTCAGTCAGCTGATTCAGGGCAGTCAGACAATAGTGGCAGAGCCGGAAGAATAC
ACACCGCGAAGCCGCCGTATTCTGGAAATCGCTAACCGTGAAGCCATGCGGTTCAGAGCTTCGGCCATAGGAACGGAACA
TCTTTTGATTGCCATATTAAGAGAAACAGATTGTGTTGCGGCGCAGTTGTTATATTCCCTTGGTGTGCAGGCCCAGAAGG
TTTATCAGGATATTGTACTTGGTATCGGTATGGATGCCAGGGCAGCGAAGGCAGATATGCCGTCGGCCAAGGGCAAGTCG
CGGAGAAAGAATGAACCTTTAATGGTTGATCAGTACAGCAGAGATCTGACGGCCTATGCCAGAGAGGGCAAACTGGATCC
GGTGATTGGACGTCATGATGAGATTCAGCGGGTGATTCAGATACTTTCCAGAAGAACGAAGAACAATCCTTGCCTGATTG
GTGAGCCTGGTGTTGGCAAAACCGCTGTTGCGGAAGGACTGGCACAGAAGATTATCAGCGGCAATGTACCTGAGACAATC
AAGGACAAGCGGGTTCTGACACTGGATATTTCCGGCATGGTGGCCGGTTCAAAGTACCGGGGTGAATTTGAAGAGCGCAT
TAAACGCGTAATCAATGAAGTCAAAGAAGATGGCAATATTTTGCTTTTCATCGACGAAATTCACACGATTATCGGTGCCG
GCGGTGCGGAAGGTGCCATTGATGCGGCCAATATCCTGAAACCGTCGCTGGCCAGAGGTGAACTGCAGATTATCGGTGCC
ACGACCATTGAAGAATATAGGAAGCATATTGAGAAGGATGCGGCCCTTGAACGTCGTTTTCAGCCGGTAATGGTGGAGGA
ACCATCTGAGGAGGAAGCCGTTGAGATTCTGATCGGTCTGAAGGGAGCGTATGAGAATCATCATCACGTGACCATTACAG
ATGAGGCTCTGGAGGCAGCTGTTCATTTGTCTGCAAGGTATATCAATGATCGTTTTCTTCCGGATAAGGCCATTGATCTG
ATCGATGAAGCGTGCTCCAAGGTAAGACTGAGCTCTTACACATCATCCCCAAAAGTAAAAGAATTAGAGAAAAAGGTAGC
GGAACTTGAGGAAGAGAAAGAGCAGGCTATTAAGGATGAAGCCTATGAACGGGCCAGTGAGATCAAGAAGATGCAGAAGG
AATTAAATGATGAGATGATCCGCCTTAACAGCGAGTGGGAAAAGGTTCGCAGCAGCGAACAGTTGATCGTTGGAGAGAAC
GAAGTAGCAGACATTGTGGCCAGTTGGACCAAAATTCCGGTCAGAAAGCTTGAAGAAGAAGAGTCAGAACGCCTGAGAAA
GCTTGAATCGATTCTGCATGAACGTGTGATCGGTCAGGAGGAAGCCGTAAGTGCAGTGGCCAAAGCCATCCGACGTGGCA
GAGTCGGTCTGAAAGATCCGAAGCGCCCGATTGGTTCCTTCCTGTTCCTGGGACCTACAGGTGTCGGCAAAACGGAATTG
TCCAAGGCGCTGGCAGAGGCAATGTTCGGCAAGGAGGATGCCATGATCCGGGTTGACATGTCAGAATACATGGAGAAACA
CAGTGTGTCTAAACTTATCGGATCACCTCCGGGATACGTCGGCTATGATGAGGGAGGACAGCTCAGTGAGAAGATCAGAC
GGAATCCTTACTCGGTTTTACTGTTTGATGAGATTGAGAAGGCACACCCGGATATTTTCAATATTCTTCTGCAAGTTCTC
GATGACGGTCATATTACAGATTCTCAGGGAAGAAAAATTGATTTCAAGAATACAGTGATCATCATGACTTCGAATGCCGG
AGCAGCCAATATTGTCACACCGAAGAAACTGGGATTTTCAGTGGGTGATACACATGAAGCAGATTATCAGAAGATGAAAG
CCGGTGTCATGGATGAAGTGAAACACCTTTTTAAACCGGAGTTTTTAAATCGTATCGATGAGACGATTGTTTTCCATCCG
CTGACGAAGGAGAATGTCAAGGATATAGCGGATATTATGCTGAAGACAATCAGCAAAAGAATTAAGGAGCAGCTGGGGGT
TGAAACTGTGGTTTCTGAAGCTGTCCGTGATCATCTGGCAGAAAAAGGGTTTGATGAGAATTATGGTGCACGTCCGCTCA
GAAGGGTTATCCAGAATGAGATTGAAGATGCCATGGCAGAAGAATATCTGGATGGCAAGTTTGTCCAAGGAGATACCGTT
GCACTTGAAATGAATGAAAATCATATTAAATTTGTTAGAAAATAA

Protein sequence :
MQYRFTQMAANVMHYSKEVAAELNHSYIGTEHILIGLLREKEGLACQVLEDHDVTEEKVLHMVSQLIQGSQTIVAEPEEY
TPRSRRILEIANREAMRFRASAIGTEHLLIAILRETDCVAAQLLYSLGVQAQKVYQDIVLGIGMDARAAKADMPSAKGKS
RRKNEPLMVDQYSRDLTAYAREGKLDPVIGRHDEIQRVIQILSRRTKNNPCLIGEPGVGKTAVAEGLAQKIISGNVPETI
KDKRVLTLDISGMVAGSKYRGEFEERIKRVINEVKEDGNILLFIDEIHTIIGAGGAEGAIDAANILKPSLARGELQIIGA
TTIEEYRKHIEKDAALERRFQPVMVEEPSEEEAVEILIGLKGAYENHHHVTITDEALEAAVHLSARYINDRFLPDKAIDL
IDEACSKVRLSSYTSSPKVKELEKKVAELEEEKEQAIKDEAYERASEIKKMQKELNDEMIRLNSEWEKVRSSEQLIVGEN
EVADIVASWTKIPVRKLEEEESERLRKLESILHERVIGQEEAVSAVAKAIRRGRVGLKDPKRPIGSFLFLGPTGVGKTEL
SKALAEAMFGKEDAMIRVDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLSEKIRRNPYSVLLFDEIEKAHPDIFNILLQVL
DDGHITDSQGRKIDFKNTVIIMTSNAGAANIVTPKKLGFSVGDTHEADYQKMKAGVMDEVKHLFKPEFLNRIDETIVFHP
LTKENVKDIADIMLKTISKRIKEQLGVETVVSEAVRDHLAEKGFDENYGARPLRRVIQNEIEDAMAEEYLDGKFVQGDTV
ALEMNENHIKFVRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CC1_34440 YP_007771378.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 55
CC1_34440 YP_007771378.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 9e-144 55